RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CALHM3Q86XJ0 350 aa13.01□□□□□ -0.33
SMC5-201ENST00000361138 RBM45Q8IUH3 476 aaKnown RBP13.01□□□□□ -0.33
SMC5-201ENST00000361138 OR51T1Q8NGJ9 327 aa13.01□□□□□ -0.33
SMC5-201ENST00000361138 C3orf49Q96BT1 292 aa13.01□□□□□ -0.33
SMC5-201ENST00000361138 TBC1D20Q96BZ9 403 aa13.01□□□□□ -0.33
SMC5-201ENST00000361138 MMABQ96EY8 250 aaPredicted RBP13.01□□□□□ -0.33
SMC5-201ENST00000361138 CRB3Q9BUF7 120 aa13.01□□□□□ -0.33
SMC5-201ENST00000361138 NOX4Q9NPH5 578 aa13.01□□□□□ -0.33
SMC5-201ENST00000361138 A8MVJ9 347 aa13□□□□□ -0.33
SMC5-201ENST00000361138 RGS13O14921 159 aa13□□□□□ -0.33
SMC5-201ENST00000361138 C2orf27AQ580R0 203 aa13□□□□□ -0.33
SMC5-201ENST00000361138 TM4SF18Q96CE8 201 aa13□□□□□ -0.33
SMC5-201ENST00000361138 ANKRD19PQ9H560 264 aa13□□□□□ -0.33
SMC5-201ENST00000361138 CYP8B1Q9UNU6 501 aa13□□□□□ -0.33
SMC5-201ENST00000361138 TIMP2P16035 220 aa13□□□□□ -0.33
SMC5-201ENST00000361138 DGCR2P98153 550 aa13□□□□□ -0.33
SMC5-201ENST00000361138 FOXK2Q01167 660 aa13□□□□□ -0.33
SMC5-201ENST00000361138 CCNJQ5T5M9 372 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SGPP2Q8IWX5 399 aa13□□□□□ -0.33
SMC5-201ENST00000361138 OR6N1Q8NGY5 312 aa13□□□□□ -0.33
SMC5-201ENST00000361138 RTP3Q9BQQ7 232 aa13□□□□□ -0.33
SMC5-201ENST00000361138 C2orf42Q9NWW7 574 aa13□□□□□ -0.33
SMC5-201ENST00000361138 HIF3AQ9Y2N7 669 aa13□□□□□ -0.33
SMC5-201ENST00000361138 FGF18O76093 207 aa13□□□□□ -0.33
SMC5-201ENST00000361138 TYRP1P17643 537 aa13□□□□□ -0.33
SMC5-201ENST00000361138 GDF7Q7Z4P5 450 aa13□□□□□ -0.33
SMC5-201ENST00000361138 OR6T1Q8NGN1 323 aa13□□□□□ -0.33
SMC5-201ENST00000361138 PGAM5Q96HS1 289 aa13□□□□□ -0.33
SMC5-201ENST00000361138 ST6GALNAC5Q9BVH7 336 aa13□□□□□ -0.33
SMC5-201ENST00000361138 POFUT1Q9H488 388 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SLC35A3Q9Y2D2 325 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SCO2O43819 266 aa13□□□□□ -0.33
SMC5-201ENST00000361138 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
SMC5-201ENST00000361138 PSMB5P28074 263 aa13□□□□□ -0.33
SMC5-201ENST00000361138 ALDH3B1P43353 468 aa13□□□□□ -0.33
SMC5-201ENST00000361138 ELAVL3Q14576 367 aaKnown RBP13□□□□□ -0.33
SMC5-201ENST00000361138 GRAMD2AQ8IUY3 354 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SSX3Q99909 188 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
SMC5-201ENST00000361138 CHST8Q9H2A9 424 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SLC25A32Q9H2D1 315 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SPATA6Q9NWH7 488 aaPredicted RBP13□□□□□ -0.33
SMC5-201ENST00000361138 LRFN1Q9P244 771 aa13□□□□□ -0.33
SMC5-201ENST00000361138 PAPLNO95428 1278 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SYN1P17600 705 aa13□□□□□ -0.33
SMC5-201ENST00000361138 SRMP19623 302 aa13□□□□□ -0.33
SMC5-201ENST00000361138 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
SMC5-201ENST00000361138 C10orf90Q96M02 699 aa13□□□□□ -0.33
SMC5-201ENST00000361138 PIGMQ9H3S5 423 aa13□□□□□ -0.33
SMC5-201ENST00000361138 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
SMC5-201ENST00000361138 CRTAPO75718 401 aaPredicted RBP12.99□□□□□ -0.33
SMC5-201ENST00000361138 THEGLP0DJG4 465 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 ZP3P21754 424 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 TNK1Q13470 666 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 OVCH1Q7RTY7 1134 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 FNDC9Q8TBE3 224 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 TANKQ92844 425 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 DTD2Q96FN9 168 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 C16orf58Q96GQ5 468 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 SMIM3Q9BZL3 60 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 GPR34Q9UPC5 381 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 B3GALT1Q9Y5Z6 326 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 PMS2P2O95744 297 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 HIST1H1TP22492 207 aaPredicted RBP12.99□□□□□ -0.33
SMC5-201ENST00000361138 SLC26A5P58743 744 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 AADACL4Q5VUY2 407 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 CARD17Q5XLA6 110 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 FAM122BQ7Z309 247 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 ZNF709Q8N972 641 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 LMNTD1Q8N9Z9 388 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 SEC22AQ96IW7 307 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 SAMD11Q96NU1 681 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 B3GAT2Q9NPZ5 323 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 SSX2Q16385 188 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 MRPL2Q5T653 305 aaKnown RBP12.99□□□□□ -0.33
SMC5-201ENST00000361138 HHATLQ9HCP6 504 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 NPFFR2Q9Y5X5 522 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 SYT5O00445 386 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 AIFM1O95831 613 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 PLCXD2Q0VAA5 305 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 DHCR24Q15392 516 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 MCEMP1Q8IX19 187 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 CPXM2Q8N436 756 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 LINC01465Q8N7H1 131 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 SLC6A20Q9NP91 592 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 ACOXLQ9NUZ1 547 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 STEAP1Q9UHE8 339 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 CHST2Q9Y4C5 530 aa12.99□□□□□ -0.33
SMC5-201ENST00000361138 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 LATO43561 262 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 SSX4O60224 188 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
SMC5-201ENST00000361138 CD79BP40259 229 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 YIF1BQ5BJH7 314 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 ACSM5Q6NUN0 579 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 ZC3H14Q6PJT7 736 aaKnown RBP12.98□□□□□ -0.33
SMC5-201ENST00000361138 RASGRP3Q8IV61 690 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 OR4K17Q8NGC6 315 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
SMC5-201ENST00000361138 SORCS2Q96PQ0 1159 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms