RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LMAN1LQ9HAT1 526 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SPHK1Q9NYA1 384 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 CNIH4Q9P003 139 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF281Q9Y2X9 895 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF142P52746 1687 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF264O43296 627 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 STSP08842 583 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 RAB5CP51148 216 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 DYRK1AQ13627 763 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 C14orf28Q4W4Y0 310 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 NLGN4YQ8NFZ3 816 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 CMTM2Q8TAZ6 248 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR52A5Q9H2C5 316 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 CA3P07451 260 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 IGDCC3Q8IVU1 814 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF595Q8IYB9 648 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SAP130Q9H0E3 1048 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 NKX2-4Q9H2Z4 354 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SLA2Q9H6Q3 261 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 AK6Q9Y3D8 172 aaKnown RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 MYOM1P52179 1685 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 RGS11O94810 467 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 HLA-HP01893 362 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR4D1Q15615 310 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 FAM199XQ6PEV8 388 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 SLC46A3Q7Z3Q1 461 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 LRRC56Q8IYG6 542 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 CISD2Q8N5K1 135 aaKnown RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 HLA-CQ95604 372 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 CHRNB1P11230 501 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 RAB38P57729 211 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 STK11Q15831 433 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 FGGYQ96C11 551 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 C4orf36Q96KX1 117 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 NTMT1Q9BV86 223 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR7A17O14581 309 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 P2RY2P41231 377 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SLC14A1Q13336 389 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 HABP2Q14520 560 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR1Q1Q15612 314 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 PSAPL1Q6NUJ1 521 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR56B1Q8NGI3 324 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR51B6Q9H340 312 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SYNPO2LQ9H987 977 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 KCND3Q9UK17 655 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 WASH4PA8MWX3 477 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 TAZQ16635 292 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR6F1Q8NGZ6 308 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 DPH1Q9BZG8 443 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF436Q9C0F3 470 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 SEMA4GQ9NTN9 838 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR5H15A6NDH6 313 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR5H14A6NHG9 310 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 OR5H1A6NKK0 313 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 TOXO94900 526 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 FAM57BQ71RH2 274 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 CPOQ8IVL8 374 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SLC46A1Q96NT5 459 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 WDR83Q9BRX9 315 aaKnown RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 NMNAT2Q9BZQ4 307 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF443Q9Y2A4 671 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 LRP5LA4QPB2 252 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 CD70P32970 193 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 CMPK2Q5EBM0 449 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 MCATQ8IVS2 390 aaKnown RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 TMEM178AQ8NBL3 297 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 IL17FQ96PD4 163 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 RTP3Q9BQQ7 232 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 PBX4Q9BYU1 374 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 NIPAL2Q9H841 368 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 GPRIN2O60269 458 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 CD53P19397 219 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 OPRD1P41143 372 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 TMEM184AQ6ZMB5 413 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 FGF13Q92913 245 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 TXNRD2Q9NNW7 524 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 RNF24Q9Y225 148 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 LAMB4A4D0S4 1761 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SLC35F3Q8IY50 421 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 RNF175Q8N4F7 328 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 ACOT4Q8N9L9 421 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 NT5DC2Q9H857 520 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SERTAD4Q9NUC0 356 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 ZNF254O75437 659 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 RHBDD1Q8TEB9 315 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SHPRHQ149N8 1683 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 FCGR2AP12318 317 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 ZMAT1Q5H9K5 638 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 CST9LP1Q5W188 147 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 OR52W1Q6IF63 320 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SLC41A2Q96JW4 573 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 VN1R3Q9BXE9 311 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 BDP1A6H8Y1 2624 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 MPPED2Q15777 294 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 GPR155Q7Z3F1 870 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 HMGN2P46Q86SG4 172 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 ZNF679Q8IYX0 411 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 OR5K2Q8NHB8 316 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms