RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 EFCAB7A8K855 629 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 F8W036 122 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 H3BMQ9 156 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SYT5O00445 386 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DSCR3O14972 297 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 RGS10O43665 173 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 PRAMEF2O60811 474 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ALOX12BO75342 701 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SLITRK5O94991 958 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 AGR2O95994 175 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ADAP00813 363 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DBIP07108 87 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SP9P0CG40 484 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 CKMT1AP12532 417 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SELLP14151 372 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 RPS4Y1P22090 263 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 NOS3P29474 1203 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 OMPP47874 163 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 NR0B1P51843 470 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 NKX2-5P52952 324 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 PSMD4P55036 377 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 TSPAN5P62079 268 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 FUT7Q11130 342 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ST3GAL3Q11203 375 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ST3GAL4Q11206 333 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 IL18R1Q13478 541 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 COTL1Q14019 142 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 TRAM2Q15035 370 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ANGPT1Q15389 498 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SF3A2Q15428 464 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SOWAHCQ53LP3 525 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 HES5Q5TA89 166 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 PRAMEF8Q5VWM4 474 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 PRAMEF7Q5VXH5 474 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 OR5M10Q6IEU7 315 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 CBLN3Q6UW01 205 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ARSKQ6UWY0 536 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 C9orf40Q8IXQ3 194 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DTX3Q8N9I9 347 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 BBS1Q8NFJ9 593 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 OR13F1Q8NGS4 319 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 OR13C2Q8NGS9 318 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 TBC1D15Q8TC07 691 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 STT3BQ8TCJ2 826 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 ZNF721Q8TF20 911 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SLC38A4Q969I6 547 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 TP53INP1Q96A56 240 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SAMD8Q96LT4 415 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 STACQ99469 402 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DOK1Q99704 481 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 PRSS27Q9BQR3 290 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 LMF2Q9BU23 707 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DUSP23Q9BVJ7 150 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DUSP21Q9H596 190 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 MED20Q9H944 212 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 Q9N2J8 555 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 PRDM9Q9NQV7 894 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 DNAJB12Q9NXW2 375 aaKnown RBP4.67□□□□□ -1.66
ATXN3-202ENST00000359366 SCN3BQ9NY72 215 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 CLEC2DQ9UHP7 191 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 MGAT4BQ9UQ53 548 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 CEP250Q9BV73 2442 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 GVINP1Q7Z2Y8 2422 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 FAM186AA6NE01 2351 aa4.67□□□□□ -1.66
ATXN3-202ENST00000359366 IGKV3D-11A0A0A0MRZ8 115 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 PNMA8CA0A1B0GUJ8 204 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 A0A1B0GWA3 101 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 LOC390937A0A1W2PQ73 354 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 LRRTM2O43300 516 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 ZNF354AO60765 605 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-202ENST00000359366 NOL3O60936 208 aaKnown RBP4.66□□□□□ -1.66
ATXN3-202ENST00000359366 ICOSLGO75144 302 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 REM1O75628 298 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 LYPD3O95274 346 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 CSTAP01040 98 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 PTHP01270 115 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 HEXBP07686 556 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 ZGLP1P0C6A0 271 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 IFI30P13284 250 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 ZNF182P17025 639 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-202ENST00000359366 RAB3AP20336 220 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 MPLP40238 635 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 ACAA2P42765 397 aaKnown RBP4.66□□□□□ -1.66
ATXN3-202ENST00000359366 CDC42P60953 191 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 RAB4BP61018 213 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 GALK2Q01415 458 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 SNTA1Q13424 505 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 TOP3AQ13472 1001 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-202ENST00000359366 SNAPC1Q16533 368 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 NKAIN1Q4KMZ8 207 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 C1orf94Q6P1W5 598 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 XKRXQ6PP77 449 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 KIRREL2Q6UWL6 708 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 IGFN1Q86VF2 1251 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 LRRC17Q8N6Y2 441 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 OR4Q3Q8NH05 313 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 OR51A7Q8NH64 312 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 PIGXQ8TBF5 258 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 LRRC20Q8TCA0 184 aa4.66□□□□□ -1.66
ATXN3-202ENST00000359366 SMAP2Q8WU79 429 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms