RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 DHCR24Q15392 516 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 RAB30Q15771 203 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ADGRF1Q5T601 910 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 BVESQ8NE79 360 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 OR4K17Q8NGC6 315 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 OR51L1Q8NGJ5 315 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CMSS1Q9BQ75 279 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ANKRD36CQ5JPF3 1778 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PHOX2AO14813 284 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MEF2AQ02078 507 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SP2Q02086 613 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 TARBP2Q15633 366 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 TAF9Q16594 264 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 VARS2Q5ST30 1063 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MEPCEQ7L2J0 689 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 HUS1BQ8NHY5 278 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 GPR78Q96P69 363 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 LAP3P28838 519 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CTU1Q7Z7A3 348 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 FAM213BQ8TBF2 198 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 NPAS1Q99742 590 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 C1QTNF2Q9BXJ5 285 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 RIMS1Q86UR5 1692 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SCN10AQ9Y5Y9 1956 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 FBXO45P0C2W1 286 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF136P52737 540 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 H3F3AP84243 136 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CCINQ13939 588 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PAQR6Q6TCH4 344 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SUSD1Q6UWL2 747 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SLC41A2Q96JW4 573 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 EGLN3Q9H6Z9 239 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SOHLH2Q9NX45 425 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MIOXQ9UGB7 285 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 GLOD5A6NK44 160 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 GASTP01350 101 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 KCNJ10P78508 379 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 MFGE8Q08431 387 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 LRIF1Q5T3J3 769 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR52E2Q8NGJ4 325 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR8D4Q8NGM9 314 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 RSC1A1Q92681 617 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PAPOLGQ9BWT3 736 aaKnown RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM231Q9H6L2 316 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 FLVCR2Q9UPI3 526 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 WIF1Q9Y5W5 379 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 MFSD2BA6NFX1 497 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF850A8MQ14 1090 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR2T1O43869 369 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 FABP4P15090 132 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 MGMTP16455 207 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SHC1P29353 583 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 MOGAT2Q3SYC2 334 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF362Q5T0B9 420 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 AMZ2Q86W34 360 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 FUNDC1Q8IVP5 155 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 COMMD1Q8N668 190 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR10D4PQ8NGN7 298 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PLEKHM1Q9Y4G2 1056 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 GPR37L1O60883 481 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SLC14A1Q13336 389 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 EIF2B1Q14232 305 aaKnown RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 LILRB2Q8N423 598 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CAMKVQ8NCB2 501 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR56B2PQ8NGI1 322 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 BRI3BPQ8WY22 251 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 RSPRY1Q96DX4 576 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR51I2Q9H344 312 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR6C76A6NM76 312 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 DVL2O14641 736 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ATG12O94817 140 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 HEXBP07686 556 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ADRA1AP35348 466 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 EPHA4P54764 986 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF239Q16600 458 aaKnown RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 C5orf46Q6UWT4 87 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CSNK1G3Q9Y6M4 447 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 LOC105371267A0A1B0GV96 52 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SLC38A8A6NNN8 435 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ILKQ13418 452 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ANKRD34AQ69YU3 496 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF322Q6U7Q0 402 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 FCRLAQ7L513 359 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 BCDIN3DQ7Z5W3 292 aaKnown RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 LMLNQ96KR4 655 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ACTL8Q9H568 366 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 MED20Q9H944 212 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ANKUB1A6NFN9 424 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM88BA6NKF7 163 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 KIAA0355O15063 1070 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 STK17BO94768 372 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ITGB2P05107 769 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PFKMP08237 780 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 HNF1AP20823 631 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CTHP32929 405 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PPM1AP35813 382 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 XCR1P46094 333 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ACTBL2Q562R1 376 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms