RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 EIF3MQ7L2H7 374 aaKnown RBP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 C6orf120Q7Z4R8 191 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 C10orf107Q8IVU9 208 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 RFLNBQ8N5W9 214 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 TMCO5AQ8N6Q1 288 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZNF540Q8NDQ6 660 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 OR52E4Q8NGH9 312 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 OR5D16Q8NGK9 328 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZHX1-C8orf76Q96EF9 292 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 PPP3R2Q96LZ3 170 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 FOXN4Q96NZ1 517 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 SORCS2Q96PQ0 1159 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 PIMREGQ9BSJ6 248 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 BHLHE41Q9C0J9 482 aaPredicted RBP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZNF350Q9GZX5 532 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 SAP130Q9H0E3 1048 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 C12orf65Q9H3J6 166 aaKnown RBP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 SERHL2Q9H4I8 314 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 CHODLQ9H9P2 273 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 EML4Q9HC35 981 aaKnown RBP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 MYOZ1Q9NP98 299 aaPredicted RBP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 CTPS2Q9NRF8 586 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 SLC7A10Q9NS82 523 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 ATAD3AQ9NVI7 634 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 PARPBPQ9NWS1 579 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 TMEM181Q9P2C4 612 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 CHRNA9Q9UGM1 479 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 AMDHD2Q9Y303 409 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 TRAF6Q9Y4K3 522 aa7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 SPIN1Q9Y657 262 aaPredicted RBP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL4A3BP-202ENST00000357457 MGAM2Q2M2H8 2515 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 CENPVL1A0A0U1RR11 272 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 EIF1BO60739 113 aaKnown RBP7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 TRIM13O60858 407 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 BCAS1O75363 584 aaPredicted RBP7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 CYP7B1O75881 506 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 TGFAP01135 160 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 UBTFL6P0CB48 400 aaPredicted RBP7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 TFPIP10646 304 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 APEHP13798 732 aaKnown RBP7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 PRPS1L1P21108 318 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 PAX7P23759 505 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 MPGP29372 298 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 MAGEA8P43361 318 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 PRPS1P60891 318 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 TGFBR3Q03167 851 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 PTGR1Q14914 329 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 SLC17A1Q14916 467 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZSWIM7Q19AV6 140 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 CR1LQ2VPA4 569 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 XKR7Q5GH72 579 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 C6orf136Q5SQH8 315 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 TSPO2Q5TGU0 170 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 BHLHB9Q6PI77 547 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 GRINAQ7Z429 371 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 KRTCAP2Q8N6L1 136 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 RNF217Q8TC41 542 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 MIPOL1Q8TD10 442 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 TWIST2Q8WVJ9 160 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZG16BQ96DA0 208 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 FBXO17Q96EF6 278 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 PRPF18Q99633 342 aaKnown RBP7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 SOX7Q9BT81 388 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 MKLN1Q9UL63 735 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 SLC35A3Q9Y2D2 325 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 FIS1Q9Y3D6 152 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 FLVCR1Q9Y5Y0 555 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 FKBP7Q9Y680 259 aa7.48□□□□□ -1.21
COL4A3BP-202ENST00000357457 WNK2Q9Y3S1 2297 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 A6NJY4 79 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 TMEM233B4DJY2 109 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 B9A039 149 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 ATP6V1G2-DDX39BF2Z307 99 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PIP5K1BO14986 540 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZNF208O43345 1280 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 KIAA0513O60268 411 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 NPHS1O60500 1241 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PEX11AO75192 247 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PDE5AO76074 875 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 WNT11O96014 354 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 CHRNGP07510 517 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 TACSTD2P09758 323 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 FAM153BP0C7A2 387 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 IMPDH2P12268 514 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 GIFP27352 417 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 SERPINF1P36955 418 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 HTR3AP46098 478 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 MAP2K6P52564 334 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 OR2B6P58173 313 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 RPS26P62854 115 aaKnown RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 SLC35A1P78382 337 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PLAURQ03405 335 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 RUNX1T1Q06455 604 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PCLAFQ15004 111 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 EFNB3Q15768 340 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 FAM153CQ494X1 144 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 SPDYE7PQ495Y7 208 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 IL23RQ5VWK5 629 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms