RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 PTPRCAPQ14761 206 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 EXOSC6Q5RKV6 272 aaKnown RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 SERPINA12Q8IW75 414 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 C12orf76Q8N812 135 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 PKMYT1Q99640 499 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 GMPR2Q9P2T1 348 aaKnown RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 IQCF3P0C7M6 154 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 FOLR1P15328 257 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 BEX5Q5H9J7 111 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 SLC25A21Q9BQT8 299 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 NRIP3Q9NQ35 241 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 OSGIN1Q9UJX0 560 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 POLHQ9Y253 713 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 C2orf78A6NCI8 922 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 MROH6A6NGR9 719 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 TRHRP34981 398 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 LTB4RQ15722 352 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 ATPAF1Q5TC12 328 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 C18orf63Q68DL7 685 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 TMUB2Q71RG4 321 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 WDR5BQ86VZ2 330 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 UBL7Q96S82 380 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 NKX3-1Q99801 234 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 MAP2P11137 1827 aaKnown RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 TMEM212A6NML5 194 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 LILRB3O75022 631 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 FBXO45P0C2W1 286 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 RFX2P48378 723 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 ZNF92Q03936 586 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 SRYQ05066 204 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 PDZK1IP1Q13113 114 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 EBPQ15125 230 aaKnown RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 ZNF574Q6ZN55 896 aaPredicted RBP12.03□□□□□ -0.48
SMC4-202ENST00000357388 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 MDGA2Q7Z553 956 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 METTL9Q9H1A3 318 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 XYLT2Q9H1B5 865 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 CHRDQ9H2X0 955 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 GAREM1Q9H706 876 aa12.03□□□□□ -0.48
SMC4-202ENST00000357388 BLACEA4D250 179 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 AP1G1O43747 822 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 GABARAPO95166 117 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 GJB5O95377 273 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 TFAP2AP05549 437 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 SNCAP37840 140 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 RPS18P62269 152 aaKnown RBP12.02□□□□□ -0.48
SMC4-202ENST00000357388 MAP4K2Q12851 820 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 COTL1Q14019 142 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 FCN2Q15485 313 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 EEF1A1P5Q5VTE0 462 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 TIGD3Q6B0B8 471 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 SLC46A3Q7Z3Q1 461 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 MKXQ8IYA7 352 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 KLHDC8AQ8IYD2 350 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 TSACCQ96A04 125 aaPredicted RBP12.02□□□□□ -0.48
SMC4-202ENST00000357388 DUSP23Q9BVJ7 150 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 ZCCHC4Q9H5U6 513 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 INIPQ9NRY2 104 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 SIDT1Q9NXL6 827 aaKnown RBP12.02□□□□□ -0.48
SMC4-202ENST00000357388 FAM96BQ9Y3D0 163 aa12.02□□□□□ -0.48
SMC4-202ENST00000357388 ALPLP05186 524 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 CALCRP30988 508 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 GATMP50440 423 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 PIN1Q13526 163 aaPredicted RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 SLC9A3R2Q15599 337 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 APIPQ96GX9 242 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 CCNL2Q96S94 520 aaPredicted RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 HRH3Q9Y5N1 445 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 ZNF840PA6NDX5 716 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 PPP5D1E7EU14 171 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 M0R3H8 397 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 CYTIPO60759 359 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 GPR32O75388 356 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 RPS17P08708 135 aaKnown RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 GABRR1P24046 479 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 HMGCLP35914 325 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 ZNF91Q05481 1191 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 NR0B2Q15466 257 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 NNATQ16517 81 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 PSAPL1Q6NUJ1 521 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 H3F3CQ6NXT2 135 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 FCRLAQ7L513 359 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 ZNF629Q9UEG4 869 aaPredicted RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 MEIS3P1A6NDR6 274 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 STK19P49842 368 aaPredicted RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 OPN5Q6U736 354 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 SLC43A2Q8N370 569 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 PEX11GQ96HA9 241 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms