RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DNPH1O43598 174 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 FZD7O75084 574 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 RCBTB2O95199 551 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CLDN14O95500 239 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 PMS2P2O95744 297 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 LGI1O95970 557 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 GKN3PP0CG01 181 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TMIGD3P0DMS9 266 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SHC1P29353 583 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 AQP1P29972 269 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SLC7A1P30825 629 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ACAA2P42765 397 aaKnown RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SLC1A3P43003 542 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CPA2P48052 419 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 KCNJ5P48544 419 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 IDH2P48735 452 aaKnown RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 GSK3BP49841 420 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SUCLG1P53597 346 aaKnown RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CLDN15P56746 228 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CLDN20P56880 219 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 RGS8P57771 180 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 COPZ1P61923 177 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SRYQ05066 204 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 LIPEQ05469 1076 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 DMTNQ08495 405 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF239Q16600 458 aaKnown RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SYT14P1Q58G82 188 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 HBMQ6B0K9 141 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 OR2A2Q6IF42 318 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 C5orf46Q6UWT4 87 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 C3P1Q6ZMU1 363 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SEM1Q6ZVN7 128 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 NCCRP1Q6ZVX7 275 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 MRGPRGQ86SM5 289 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 UBQLNLQ8IYU4 475 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CLIP4Q8N3C7 705 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 C9orf106Q8NAJ2 232 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 GPR32P1Q8NGA4 272 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 OR10D3Q8NH80 312 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 BCAS4Q8TDM0 211 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CPNE4Q96A23 557 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 C3orf49Q96BT1 292 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SDCCAG3Q96C92 435 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 DDIT4LQ96D03 193 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 DMRTB1Q96MA1 342 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 KCTD14Q9BQ13 255 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TRIM2Q9C040 744 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TIGARQ9NQ88 270 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CTPS2Q9NRF8 586 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TMEM181Q9P2C4 612 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 RPS6KB2Q9UBS0 482 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 Q9UFV3 132 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 BAG5Q9UL15 447 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 RNF6Q9Y252 685 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SLC9A8Q9Y2E8 581 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TMED7Q9Y3B3 224 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 HDGFL3Q9Y3E1 203 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SPENQ96T58 3664 aaKnown RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TMEM72A0PK05 275 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CCT8L1PA6NM43 557 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 KDM4EB2RXH2 506 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CXCR6O00574 342 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 DVL2O14641 736 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 GSTA4O15217 222 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 FRS3O43559 492 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 EFNA2O43921 213 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CXCL13O43927 109 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 GCM2O75603 506 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 OPN1SWP03999 348 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 HSD17B1P14061 328 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 IL11P20809 199 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CALB2P22676 271 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CTSSP25774 331 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 HTR2AP28223 471 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 HTR1EP28566 365 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TACR3P29371 465 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 RYKP34925 604 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SFTPDP35247 375 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 OPRM1P35372 400 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ASCL1P50553 236 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF136P52737 540 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CSNK2A1P68400 391 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 MXRA7P84157 204 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 PMPCAQ10713 525 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 GUSBP1Q15486 140 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 LRRC23Q53EV4 343 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SAMD4BQ5PRF9 694 aaKnown RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ABLIM2Q6H8Q1 611 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 MAMDC2Q7Z304 686 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ATG4DQ86TL0 474 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 COMTD1Q86VU5 262 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 LILRA2Q8N149 483 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 CADM2Q8N3J6 435 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 FITM2Q8N6M3 262 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 LSMEM1Q8N8F7 131 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 STK35Q8TDR2 534 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SLC26A7Q8TE54 656 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 DNAJA4Q8WW22 397 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-202ENST00000356162 FIG4Q92562 907 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 PROX1Q92786 737 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms