RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NDRG3Q9UGV2 375 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 MN1Q10571 1320 aaPredicted RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 HOXC11O43248 304 aaPredicted RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR2F2O95006 317 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 CLEC2LP0C7M8 214 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 MAOBP27338 520 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR2F1Q13607 317 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 TANKQ92844 425 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 HHIPL1Q96JK4 782 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 IGKV6-21A0A0C4DH24 114 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR2T1O43869 369 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF266Q14584 549 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TEAD2Q15562 447 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 FRMD1Q8N878 549 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 MDGA1Q8NFP4 955 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 EGLN2Q96KS0 407 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SPHK2Q9NRA0 654 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TRAV27A0A087WT01 109 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 MMP2P08253 660 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 CPT2P23786 658 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TNFRSF17Q02223 184 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 ADAM5Q6NVV9 412 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 GPR137CQ8N3F9 429 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 HORMAD2Q8N7B1 307 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF566Q969W8 418 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TMEM43Q9BTV4 400 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLC2A4RGQ9NR83 387 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 OTOP2Q7RTS6 562 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 GRAMD2AQ8IUY3 354 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SKA3Q8IX90 412 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 NANOGP1Q8N7R0 232 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SENP5Q96HI0 755 aaPredicted RBP11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SEC22CQ9BRL7 303 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF160Q9HCG1 818 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 PDLIM7Q9NR12 457 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 KCNK5O95279 499 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 CNN3Q15417 329 aaKnown RBP11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TMPPEQ6ZT21 453 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF680Q8NEM1 530 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 RNF170Q96K19 258 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 WDR92Q96MX6 357 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SCML1Q9UN30 329 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TNFSF12O43508 249 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 DFFBO76075 338 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SOD2P04179 222 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 P2RX3P56373 397 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 SPOCK1Q08629 439 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 NOGQ13253 232 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR1Q1Q15612 314 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 Q499Y3 187 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TOR2AQ5JU69 321 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TBPL2Q6SJ96 375 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TTLL10Q6ZVT0 673 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 MDGA2Q7Z553 956 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 FUNDC1Q8IVP5 155 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 KLHDC8BQ8IXV7 354 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 TCTE3Q8IZS6 198 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 C1orf87Q8N0U7 546 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 CRYGNQ8WXF5 182 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 HINT2Q9BX68 163 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 CAMTA1Q9Y6Y1 1673 aa11.88□□□□□ -0.51
SYNCRIP-201ENST00000355238 CBR1P16152 277 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF43P17038 809 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 RNF4P78317 190 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 IL17RCQ8NAC3 791 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR5L2Q8NGL0 311 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 C2CD4CQ8TF44 421 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 TXN2Q99757 166 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 INIPQ9NRY2 104 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 B4DXG7 233 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 TGOLN2O43493 480 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 PFKMP08237 780 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 SRPXP78539 464 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 PDE7AQ13946 482 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 EOGTQ5NDL2 527 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 METTL27Q8N6F8 245 aaPredicted RBP11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR7D2Q96RA2 312 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 MOKQ9UQ07 419 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 TMEM129A0AVI4 362 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 K7ERQ8 282 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 FBLP22087 321 aaKnown RBP11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 ADRA1AP35348 466 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 FAM199XQ6PEV8 388 aaPredicted RBP11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR56B1Q8NGI3 324 aa11.87□□□□□ -0.51
SYNCRIP-201ENST00000355238 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms