RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 VSX2P58304 361 aaPredicted RBP10.04□□□□□ -0.8
SND1-201ENST00000354725 TRAM1Q15629 374 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 TMEM201Q5SNT2 666 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 TANGO2Q6ICL3 276 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 LAS2Q8IYD9 372 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 LRRC18Q8N456 261 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 GPBAR1Q8TDU6 330 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 TMPRSS5Q9H3S3 457 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 DECR2Q9NUI1 292 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 VPS29Q9UBQ0 182 aa10.04□□□□□ -0.8
SND1-201ENST00000354725 NDRG2Q9UN36 371 aaKnown RBP10.04□□□□□ -0.8
SND1-201ENST00000354725 ZAR1LA6NP61 321 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 ADAMDEC1O15204 470 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 KHDRBS3O75525 346 aaKnown RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 EGFP01133 1207 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 VIPP01282 170 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 IFNA10P01566 189 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 CXCL3P19876 107 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 NAE1Q13564 534 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 ADIPOQQ15848 244 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SSX1Q16384 188 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 CCDC157Q569K6 752 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 DDI2Q5TDH0 399 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SKA3Q8IX90 412 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 FAM185AQ8N0U4 392 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 PUSL1Q8N0Z8 303 aaKnown RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 CPXM2Q8N436 756 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 FTMTQ8N4E7 242 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 RNF175Q8N4F7 328 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SLC5A8Q8N695 610 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 FGF11Q92914 225 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 OR4K3Q96R72 315 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 NIPSNAP1Q9BPW8 284 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 MRTO4Q9UKD2 239 aaKnown RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 FZD4Q9ULV1 537 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 LZTS3O60299 673 aaPredicted RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 LRATO95237 230 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 OR4E1P0C645 316 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 BCL2L1Q07817 233 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 FAM198BQ6UWH4 519 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 UNQ6494/PRO21346Q6UXR6 183 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 CPOQ8IVL8 374 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 DCUN1D3Q8IWE4 304 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 PDZD9Q8IXQ8 264 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SLC34A3Q8N130 599 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 C9orf43Q8TAL5 461 aaPredicted RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 SCARB1Q8WTV0 552 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SMARCD2Q92925 531 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 GCDHQ92947 438 aaPredicted RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 DMRTA2Q96SC8 542 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 FUZQ9BT04 418 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 RSPO3Q9BXY4 272 aaPredicted RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 NT5DC2Q9H857 520 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 MYOZ1Q9NP98 299 aaPredicted RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 RAD18Q9NS91 495 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 ACER3Q9NUN7 267 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 CRLS1Q9UJA2 301 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 EXOGQ9Y2C4 368 aaKnown RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 TMEM200CA6NKL6 621 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 GPR31O00270 319 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SIX6O95475 246 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 AK1P00568 194 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 DDTP30046 118 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 CALCRP30988 508 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 SSTR4P31391 388 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 MAP4K2Q12851 820 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 TRIQKQ629K1 86 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 ZNF561Q8N587 486 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 BHLHE41Q9C0J9 482 aaPredicted RBP10.03□□□□□ -0.8
SND1-201ENST00000354725 C1GALT1Q9NS00 363 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 NCDNQ9UBB6 729 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 ZNF451Q9Y4E5 1061 aa10.03□□□□□ -0.8
SND1-201ENST00000354725 A0A087WV62 115 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 A0A1B0GVI7 797 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 MYO1GB0I1T2 1018 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 ARPC5O15511 151 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 SUV39H1O43463 412 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 PCDH7O60245 1069 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 CRYABP02511 175 aaKnown RBP10.02□□□□□ -0.8
SND1-201ENST00000354725 CRHP06850 196 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 ITGB7P26010 798 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 RPS19P39019 145 aaKnown RBP10.02□□□□□ -0.8
SND1-201ENST00000354725 MLF1P58340 268 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 DCDP81605 110 aaKnown RBP10.02□□□□□ -0.8
SND1-201ENST00000354725 TNFRSF9Q07011 255 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 RBBP4Q09028 425 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 LRRC73Q5JTD7 316 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 CHST14Q8NCH0 376 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 OR56A3Q8NH54 315 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 DIRAS2Q96HU8 199 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 COPS8Q99627 209 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 JAM3Q9BX67 310 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 EBPLQ9BY08 206 aa10.02□□□□□ -0.8
SND1-201ENST00000354725 POLDIP3Q9BY77 421 aaKnown RBP10.02□□□□□ -0.8
SND1-201ENST00000354725 SMG9Q9H0W8 520 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms