RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 DEF8Q6ZN54 512 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 SHFQ7M4L6 423 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 MCATQ8IVS2 390 aaKnown RBP9.33□□□□□ -0.92
SYNE1-203ENST00000354674 SLC5A8Q8N695 610 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 OR6S1Q8NH40 331 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 MARVELD1Q9BSK0 173 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 DUSP26Q9BV47 211 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ANKRA2Q9H9E1 313 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 IL20Q9NYY1 176 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 PLEKHB1Q9UF11 243 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-203ENST00000354674 CDH10Q9Y6N8 788 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ARID1BQ8NFD5 2236 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-203ENST00000354674 MYO15AQ9UKN7 3530 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 KNL1Q8NG31 2342 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 C2orf92A0A1B0GVN3 265 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 OR6C68A6NDL8 312 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 KRBOX1C9JBD0 128 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 H3BMH7 237 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 L7N2F9 121 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 TOX3O15405 576 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-203ENST00000354674 GADD45GO95257 159 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 DRD2P14416 443 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 LCN1P31025 176 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ALDH9A1P49189 494 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 SKP2Q13309 424 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 HEPACAMQ14CZ8 416 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 TIMM50Q3ZCQ8 353 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ANXA8L1Q5VT79 327 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 SLC25A25Q6KCM7 469 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 FAM198BQ6UWH4 519 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ABHD13Q7L211 337 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 KMT5CQ86Y97 462 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 EID2Q8N6I1 236 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 CSNK1A1LQ8N752 337 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 OR8J3Q8NGG0 315 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 HAVCR2Q8TDQ0 301 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 CNOT9Q92600 299 aaKnown RBP9.33□□□□□ -0.92
SYNE1-203ENST00000354674 UCN3Q969E3 161 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 SLC41A2Q96JW4 573 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 RSRP1Q9BUV0 290 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 TEX12Q9BXU0 123 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF226Q9NYT6 803 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 ADAMTS20P59510 1910 aa9.33□□□□□ -0.92
SYNE1-203ENST00000354674 A0A075B6Q4 140 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 E9PI62 339 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 CRYBA1P05813 215 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 EDN3P14138 238 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 AKR1C3P42330 323 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 KLHL26Q53HC5 615 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 TCTE1Q5JU00 501 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 GCNT6Q5T4J0 391 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 RGS7BPQ6MZT1 257 aaPredicted RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 ANGPTL8Q6UXH0 198 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 MMP21Q8N119 569 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 BVESQ8NE79 360 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 NAT6Q93015 286 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 C3orf49Q96BT1 292 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 SERINC2Q96SA4 455 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 C7orf50Q9BRJ6 194 aaKnown RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 SMOC1Q9H4F8 434 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 LYARQ9NX58 379 aaKnown RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 TAS2R3Q9NYW6 316 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 SPIN1Q9Y657 262 aaPredicted RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 FRYLO94915 3013 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 PROM1O43490 865 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 SLC43A1O75387 559 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 DHFRP00374 187 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 IGF2P01344 180 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 HPXP02790 462 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 CTSBP07858 339 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 CD3GP09693 182 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 CERS1P27544 350 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 BAMBIQ13145 260 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 GANABQ14697 944 aaKnown RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 ST3GAL2Q16842 350 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 MICAQ29983 383 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 OR2G6Q5TZ20 316 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 PTCHD4Q6ZW05 846 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 STX12Q86Y82 276 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 CMIPQ8IY22 773 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 D2HGDHQ8N465 521 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 SUMF1Q8NBK3 374 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 MAL2Q969L2 176 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 PPCDCQ96CD2 204 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 ZFP3Q96NJ6 502 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 ERMAPQ96PL5 475 aaPredicted RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 PDE7BQ9NP56 450 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 TEX10Q9NXF1 929 aaPredicted RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 A0A0G2JN53 185 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 A0A1W2PR48 441 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 DISC1C4P0D8 188 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 DVL2O14641 736 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 RECKO95980 971 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 CXCL2P19875 107 aa9.32□□□□□ -0.92
SYNE1-203ENST00000354674 DNAJA1P31689 397 aaKnown RBP9.32□□□□□ -0.92
SYNE1-203ENST00000354674 GPX4P36969 197 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms