RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 VEGFCP49767 419 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 SCAND1P57086 179 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 BTN3A2P78410 334 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 IL10RAQ13651 578 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 RNASE12Q5GAN4 147 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 SLC35D3Q5M8T2 416 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 MRPL2Q5T653 305 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 TMEM81Q6P7N7 255 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 ZC3H14Q6PJT7 736 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 TFAP2EQ6VUC0 442 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 HSD17B13Q7Z5P4 300 aaPredicted RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 MEIOBQ8N635 442 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 OR13C5Q8NGS8 318 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 OR14A16Q8NHC5 309 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 NXPE3Q969Y0 559 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 TOX2Q96NM4 488 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 ZNF426Q9BUY5 554 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 LGR4Q9BXB1 951 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 OR10A4Q9H209 315 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 XKR8Q9H6D3 395 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 AK6Q9Y3D8 172 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 ETV7Q9Y603 341 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PRRT4C9JH25 899 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 ACOT7O00154 380 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 HIST1H2ABP04908 130 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 ALDOBP05062 364 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 FUT1P19526 365 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 MAP2K6P52564 334 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 PSMA6P60900 246 aaKnown RBP10.52□□□□□ -0.72
CAPN9-202ENST00000354537 CAMK1Q14012 370 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 GPR68Q15743 365 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 RPE65Q16518 533 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 TP53I3Q53FA7 332 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 DCST2Q5T1A1 773 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 FHL5Q5TD97 284 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 ARSKQ6UWY0 536 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 HIST3H2AQ7L7L0 130 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 SSX6Q7RTT6 188 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 KANSL1Q7Z3B3 1105 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 CDRT4Q8N9R6 151 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 LSM14AQ8ND56 463 aaKnown RBP10.52□□□□□ -0.72
CAPN9-202ENST00000354537 OR52E1Q8NGJ3 308 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 OR52I2Q8NH67 350 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 HIST1H2ACQ93077 130 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 ELMOD3Q96FG2 381 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 TOE1Q96GM8 510 aaKnown RBP10.52□□□□□ -0.72
CAPN9-202ENST00000354537 PEX11GQ96HA9 241 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 NKIRAS2Q9NYR9 191 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 PFDN2Q9UHV9 154 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 CLEC4AQ9UMR7 237 aa10.52□□□□□ -0.72
CAPN9-202ENST00000354537 MUC22E2RYF6 1773 aaPredicted RBP10.52□□□□□ -0.73
CAPN9-202ENST00000354537 LTBP2Q14767 1821 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 A0A0B4J203 849 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 TRBV2A0A0J9YWF9 115 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 ARPC1BO15143 372 aaKnown RBP10.52□□□□□ -0.73
CAPN9-202ENST00000354537 MID1O15344 667 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 PPM1BO75688 479 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 PPP1R3DO95685 299 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 ATF4P18848 351 aaPredicted RBP10.52□□□□□ -0.73
CAPN9-202ENST00000354537 S100A11P31949 105 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 RAD52P43351 418 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 DLX5P56178 289 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 RPS15AP62244 130 aaKnown RBP10.52□□□□□ -0.73
CAPN9-202ENST00000354537 PPP2CBP62714 309 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 PPP2CAP67775 309 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 HTR4Q13639 388 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 ISXQ2M1V0 245 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 APOOLQ6UXV4 268 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 ESPNLQ6ZVH7 1005 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 CHMP1BQ7LBR1 199 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 C12orf40Q86WS4 652 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 SLC35F2Q8IXU6 374 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 CD99L2Q8TCZ2 262 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 SLC25A38Q96DW6 304 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 MYADMQ96S97 322 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 SERINC2Q96SA4 455 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 MACROD1Q9BQ69 325 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 RSPH9Q9H1X1 276 aaPredicted RBP10.52□□□□□ -0.73
CAPN9-202ENST00000354537 LDAHQ9H6V9 325 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 MEPEQ9NQ76 525 aaPredicted RBP10.52□□□□□ -0.73
CAPN9-202ENST00000354537 FLVCR2Q9UPI3 526 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 FOXJ3Q9UPW0 622 aa10.52□□□□□ -0.73
CAPN9-202ENST00000354537 A0A0B4J2E0 115 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 A0A1B0GX12 115 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 KHDRBS3O75525 346 aaKnown RBP10.51□□□□□ -0.73
CAPN9-202ENST00000354537 TOXO94900 526 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 NMBP08949 121 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 FGF2P09038 288 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 SMIM10L1P0DMW3 83 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 PPP3CBP16298 524 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 TLX1P31314 330 aaPredicted RBP10.51□□□□□ -0.73
CAPN9-202ENST00000354537 PTH2RP49190 550 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 DIO1P49895 249 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 SEC61A1P61619 476 aaKnown RBP10.51□□□□□ -0.73
CAPN9-202ENST00000354537 HLXQ14774 488 aaPredicted RBP10.51□□□□□ -0.73
CAPN9-202ENST00000354537 PAQR7Q86WK9 346 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
CAPN9-202ENST00000354537 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
CAPN9-202ENST00000354537 PNPLA2Q96AD5 504 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms