RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 HAS1Q92839 578 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RAB3CQ96E17 227 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 BORCS6Q96GS4 357 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 FAXDC2Q96IV6 333 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 C4orf36Q96KX1 117 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF587Q96SQ5 575 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 EMC7Q9NPA0 242 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 KDM4FA0A1W2PPD8 638 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 FABP1P07148 127 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ADH5P11766 374 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 HTR1EP28566 365 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 PRR27Q6MZM9 219 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF417Q8TAU3 575 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 DNAJC19Q96DA6 116 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 TRIB1Q96RU8 372 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 STRADBQ9C0K7 418 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 MAF1Q9H063 256 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SPACA1Q9HBV2 294 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 IL37Q9NZH6 218 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 KLRG2A4D1S0 409 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 OAS1P00973 400 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 PABPC4LP0CB38 370 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 PMCHP20382 165 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 DDCP20711 480 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 GSCP56915 257 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RBMS2Q15434 407 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZCCHC14Q8WYQ9 949 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 PIGQQ9BRB3 760 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SCN8AQ9UQD0 1980 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF320A2RRD8 509 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RFPL4AA6NLU0 287 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RFPL4AL1F8VTS6 287 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 AOC2O75106 756 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 EOMESO95936 686 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 POLR2CP19387 275 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 DPP4P27487 766 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF684Q5T5D7 378 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 C17orf107Q6ZR85 190 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ADGRA1Q86SQ6 560 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 GLB1L2Q8IW92 636 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SLC38A6Q8IZM9 456 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 OR5L1Q8NGL2 311 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 CREB3L4Q8TEY5 395 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 APH1BQ8WW43 257 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SAMD8Q96LT4 415 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 INIPQ9NRY2 104 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM98Q9Y2Y6 226 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 L1CAMP32004 1257 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 EARS2Q5JPH6 523 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 FFAR4Q5NUL3 377 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 LRRC18Q8N456 261 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SEC22CQ9BRL7 303 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RASD1Q9Y272 281 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 FZD7O75084 574 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RAB13P51153 203 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 JAM2P57087 298 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 OR2G3Q8NGZ4 309 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZMYND19Q96E35 227 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 PCED1AQ9H1Q7 454 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 PHF1O43189 567 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 AGTR2P50052 363 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 HSD17B13Q7Z5P4 300 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 HSD17B11Q8NBQ5 300 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SIMC1Q8NDZ2 872 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 DBF4BQ8NFT6 615 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SLC39A13Q96H72 371 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 C8orf33Q9H7E9 229 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SOX21Q9Y651 276 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 JRKO75564 520 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 TNFRSF1BP20333 461 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RBMS1P29558 406 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 MMP12P39900 470 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 MEF2AQ02078 507 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ANKRD53Q8N9V6 530 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 DEFB126Q9BYW3 111 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 HSFX1Q9UBD0 423 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 FBXW11Q9UKB1 542 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 WIF1Q9Y5W5 379 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ATRNO75882 1429 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SPATA31C2B4DYI2 1134 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 CBR3O75828 277 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ELK1P19419 428 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 GATMP50440 423 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM183BQ1AE95 376 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 OR52E8Q6IFG1 317 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF620Q6ZNG0 422 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 UBAC2Q8NBM4 344 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF845Q96IR2 970 aaPredicted RBP7.55□□□□□ -1.2
SCN8A-201ENST00000354534 POFUT1Q9H488 388 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
SCN8A-201ENST00000354534 EGLN3Q9H6Z9 239 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms