RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DCTN2Q13561 401 aaKnown RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 NCF4Q15080 339 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 GPR68Q15743 365 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 MAPK14Q16539 360 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.5□□□□□ -1.21
CD44-205ENST00000352818 FLYWCH1Q4VC44 716 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 CCNJQ5T5M9 372 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 MRPL2Q5T653 305 aaKnown RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 TMEM236Q5W0B7 351 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 PLAG1Q6DJT9 500 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 SLC27A4Q6P1M0 643 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ZNF620Q6ZNG0 422 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 DGAT2L6Q6ZPD8 337 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 QSOX2Q6ZRP7 698 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 SLC46A3Q7Z3Q1 461 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 HMGN2P46Q86SG4 172 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 KIF18BQ86Y91 864 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 SLC43A2Q8N370 569 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ZADH2Q8N4Q0 377 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 OR51Q1Q8NH59 317 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 TMEM163Q8TC26 289 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 PIK3R3Q92569 461 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 OSTF1Q92882 214 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 MMABQ96EY8 250 aaPredicted RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 PEX11GQ96HA9 241 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 GPA33Q99795 319 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ZNF559Q9BR84 538 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 DCUN1D5Q9BTE7 237 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 G6PC3Q9BUM1 346 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ALOXE3Q9BYJ1 711 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 NPDC1Q9NQX5 325 aaPredicted RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 LANCL2Q9NS86 450 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 CUTCQ9NTM9 273 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 IL20Q9NYY1 176 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ZNF223Q9UK11 482 aaPredicted RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 TMEM5Q9Y2B1 443 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 PLEKHA6Q9Y2H5 1048 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 CDH10Q9Y6N8 788 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 IGKV3D-11A0A0A0MRZ8 115 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SNTNA6NMZ2 147 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 KDM4EB2RXH2 506 aaPredicted RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 TMEM150CB9EJG8 249 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 M0R082 166 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 M0R129 80 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 FRS3O43559 492 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 CNOT3O75175 753 aaKnown RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 ENTPD6O75354 484 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 OR2B3O76000 313 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 CLPXO76031 633 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 CLPSP04118 112 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 LCKP06239 509 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 IGFBP1P08833 259 aaPredicted RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 DBTP11182 482 aaKnown RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 TNNI3P19429 210 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 ENDOUP21128 410 aaKnown RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 HTR2AP28223 471 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 C21orf33P30042 268 aaPredicted RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 LCN1P31025 176 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 HOXC12P31275 282 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 UGT2B10P36537 528 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 PLAURQ03405 335 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 ZNF91Q05481 1191 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 PRKCDQ05655 676 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 DSG2Q14126 1118 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 FGFBP1Q14512 234 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 GINS1Q14691 196 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SPCS2Q15005 226 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 OR1Q1Q15612 314 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 TIGD6Q17RP2 521 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SYT14P1Q58G82 188 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 RPL13AP3Q6NVV1 102 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 MTFR2Q6P444 385 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 IGFL2Q6UWQ7 119 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 NPSR1Q6W5P4 371 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 RRM2BQ7LG56 351 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 TMEM200AQ86VY9 491 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 CROCCP3Q8IVE0 287 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 NKAIN4Q8IVV8 208 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 TMEM151BQ8IW70 566 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 ZNF440Q8IYI8 595 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SHISA5Q8N114 240 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 CIARTQ8N365 385 aaPredicted RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 GALNT16Q8N428 558 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 PIP4P2Q8N4L2 257 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 ZNF615Q8N8J6 731 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 OR8D4Q8NGM9 314 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 TBC1D15Q8TC07 691 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 BRIX1Q8TDN6 353 aaKnown RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 RBM18Q96H35 190 aaKnown RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 HS6ST2Q96MM7 605 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 DACH2Q96NX9 599 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SLC38A2Q96QD8 506 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 PRSS27Q9BQR3 290 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 ZNF426Q9BUY5 554 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 TEX12Q9BXU0 123 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 RBCK1Q9BYM8 510 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 SPRTNQ9H040 489 aaPredicted RBP7.49□□□□□ -1.21
CD44-205ENST00000352818 PLGRKTQ9HBL7 147 aa7.49□□□□□ -1.21
CD44-205ENST00000352818 Q9N2J8 555 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms