RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 WIPF3A6NGB9 483 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 ELOA3DA6NLF2 546 aaPredicted RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 ZG16O60844 167 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 SYNGR4O95473 234 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 IL2RAP01589 272 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 PNMTP11086 282 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 TNFRSF1BP20333 461 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 OR1E2P47887 323 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 PON3Q15166 354 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 ELOA3BQ3SY89 546 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 IFI44LQ53G44 452 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 ENTPD8Q5MY95 495 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 SWT1Q5T5J6 900 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 RIPPLY2Q5TAB7 128 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 ZNF613Q6PF04 617 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 TMPPEQ6ZT21 453 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 FKBP9P1Q75LS8 142 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 P4HA3Q7Z4N8 544 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 VTCN1Q7Z7D3 282 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 ELOA3Q8NG57 546 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 GEMIN6Q8WXD5 167 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 CPNE4Q96A23 557 aaPredicted RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 SLC47A1Q96FL8 570 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 HSH2DQ96JZ2 352 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 NSMCE2Q96MF7 247 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 THTPAQ9BU02 230 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 CADM1Q9BY67 442 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 POLR2J2Q9GZM3 115 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 POLR2J3Q9H1A7 115 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 MUC13Q9H3R2 512 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 MCTS1Q9ULC4 181 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 SAMD4AQ9UPU9 718 aaKnown RBP12.51□□□□□ -0.41
SEC13-202ENST00000350697 HDGFL3Q9Y3E1 203 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 MED12LQ86YW9 2145 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 CPSF4LA6NMK7 179 aaKnown RBP12.5□□□□□ -0.41
SEC13-202ENST00000350697 A8MVM7 634 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 MGRN1O60291 552 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 PDE5AO76074 875 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 TOXO94900 526 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 TGM6O95932 706 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 FCGR2AP12318 317 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
SEC13-202ENST00000350697 DIO1P49895 249 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 CDH12P55289 794 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 RAC3P60763 192 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 CSNK2A1P68400 391 aaPredicted RBP12.5□□□□□ -0.41
SEC13-202ENST00000350697 MYBPHQ13203 477 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 PLXDC2Q6UX71 529 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 DEF8Q6ZN54 512 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 C9orf106Q8NAJ2 232 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 FNDC9Q8TBE3 224 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 STK35Q8TDR2 534 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 ADAMTS16Q8TE57 1224 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 SLC38A4Q969I6 547 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 ARL5BQ96KC2 179 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 POTEKPQ9BYX7 375 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 PRRG4Q9BZD6 226 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 COQ3Q9NZJ6 369 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 ACTR3BQ9P1U1 418 aa12.5□□□□□ -0.41
SEC13-202ENST00000350697 SPTAN1Q13813 2472 aaKnown RBP12.5□□□□□ -0.41
SEC13-202ENST00000350697 A0A087WUJ7 227 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 A0A0G2JNJ9 132 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 TRAPPC13A5PLN9 417 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 HSPB2A8KAH6 182 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 SULT2B1O00204 365 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 CHP2O43745 196 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 RCBTB2O95199 551 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 PMS2P2O95744 297 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 IFNW1P05000 195 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 AGAP20933 346 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 TRIM25Q14258 630 aaKnown RBP12.49□□□□□ -0.41
SEC13-202ENST00000350697 HSPB2Q16082 182 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 ZNF239Q16600 458 aaKnown RBP12.49□□□□□ -0.41
SEC13-202ENST00000350697 OR2A2Q6IF42 318 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 PPP4R4Q6NUP7 873 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 C5orf46Q6UWT4 87 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 MRGPRGQ86SM5 289 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
SEC13-202ENST00000350697 RNF217Q8TC41 542 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
SEC13-202ENST00000350697 ASB5Q8WWX0 329 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 CLPTM1LQ96KA5 538 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 ZFP3Q96NJ6 502 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 SRXN1Q9BYN0 137 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 Q9UFV3 132 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 RNF6Q9Y252 685 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 TRAPPC4Q9Y296 219 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
SEC13-202ENST00000350697 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
SEC13-202ENST00000350697 ZC3H12DA2A288 527 aaKnown RBP12.48□□□□□ -0.41
SEC13-202ENST00000350697 DNPH1O43598 174 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 NPIPB7O75200 414 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 CHRNB4P30926 498 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 IDUAP35475 653 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 TAS2R41P59536 307 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 MTX3Q5HYI7 312 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 C1orf140Q5VVS0 124 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms