RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 HCAR1Q9BXC0 346 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SLC7A5P2Q9GIP4 190 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 NRSN2Q9GZP1 204 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 MMP27Q9H306 513 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OCEL1Q9H607 264 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 APMAPQ9HDC9 416 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 OCIAD1Q9NX40 245 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 H2AFY2Q9P0M6 372 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 IL20RAQ9UHF4 553 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 B3GNT3Q9Y2A9 372 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CARD8Q9Y2G2 431 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 PCDHGB6Q9Y5F9 930 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 CORINQ9Y5Q5 1042 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 TECTAO75443 2155 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
TRIM55-203ENST00000350034 SCN2AQ99250 2005 aa6.32□□□□□ -1.4
TRIM55-203ENST00000350034 ASXL3Q9C0F0 2248 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 MYO18BQ8IUG5 2567 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ZZEF1O43149 2961 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 LOC102723996A0A087X1L8 192 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 IGHV3-20A0A0C4DH32 117 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CDC14CA4D256 554 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 TMEM200CA6NKL6 621 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 FAM183AA6NL82 134 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ELOA3DA6NLF2 546 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 RIIAD1A6NNX1 92 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CLDN25C9JDP6 229 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 PRR23D1E9PI22 279 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 GTPBP1O00178 669 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 MEN1O00255 615 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CPNE3O75131 537 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 APOL3O95236 402 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 TXNDC12O95881 172 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 GP1BAP07359 652 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 HEXBP07686 556 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 PRR23D2P0DMB1 279 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 HPGDP15428 266 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ACP1P24666 158 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 IL12BP29460 328 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 IDUAP35475 653 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CD79BP40259 229 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SOX3P41225 446 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 FOXL2P58012 376 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 MC2RQ01718 297 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 BDH1Q02338 343 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF117Q03924 483 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 EGR4Q05215 589 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 LTBQ06643 244 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 EFR3AQ14156 821 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CRMP1Q14194 572 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF846Q147U1 533 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ELOA3BQ3SY89 546 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ANKDD1AQ495B1 522 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SLC35F1Q5T1Q4 408 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 OR2G6Q5TZ20 316 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 PAPD4Q6PIY7 484 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CD200R1LQ6Q8B3 271 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 LYPD8Q6UX82 237 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF517Q6ZMY9 492 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SHISA6Q6ZSJ9 500 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SHFQ7M4L6 423 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CPEB2Q7Z5Q1 589 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ADCK1Q86TW2 530 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 MARCH3Q86UD3 253 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SLC15A4Q8N697 577 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SIRT6Q8N6T7 355 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 LRRC17Q8N6Y2 441 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 SLC37A3Q8NCC5 494 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 AGBL5Q8NDL9 886 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ELOA3Q8NG57 546 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 OR4F15Q8NGB8 312 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 OR5W2Q8NH69 310 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 S100ZQ8WXG8 99 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 HGDQ93099 445 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 TRMT61AQ96FX7 289 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 TEAD3Q99594 435 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 MESP1Q9BRJ9 268 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 NMNAT2Q9BZQ4 307 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 RNF167Q9H6Y7 350 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 WDR54Q9H977 334 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ZBTB20Q9HC78 741 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 NRIP3Q9NQ35 241 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 INPP5EQ9NRR6 644 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CHCHD3Q9NX63 227 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 ERVK13-1Q9NX77 482 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 TNFRSF10DQ9UBN6 386 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 KLHL21Q9UJP4 597 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 NXT1Q9UKK6 140 aaKnown RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 STUB1Q9UNE7 303 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 CAB39Q9Y376 341 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-203ENST00000350034 PCDHGA5Q9Y5G8 931 aa6.31□□□□□ -1.4
TRIM55-203ENST00000350034 KMT2EQ8IZD2 1858 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 RP1P56715 2156 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 A0A075B6Q4 140 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 LOC100506127A0A0U1RQW1 187 aa6.3□□□□□ -1.4
TRIM55-203ENST00000350034 A0A1B0GVG6 124 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms