RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TRBC1P01850 177 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SAGP10523 405 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 RNH1P13489 461 aaKnown RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ST6GAL1P15907 406 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 EPB42P16452 691 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 AMD1P17707 334 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 GJA4P35212 333 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 MAGEB1P43366 347 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ADPRHP54922 357 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 CDH11P55287 796 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 RAC1P63000 192 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SHC2P98077 582 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 IL10RAQ13651 578 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ACTBL2Q562R1 376 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 RPS26P11Q5JNZ5 115 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ADGRF1Q5T601 910 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 GFI1BQ5VTD9 330 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 CMTM4Q8IZR5 234 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ARRDC2Q8TBH0 407 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 CDCA3Q99618 268 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SEMA3CQ99985 751 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 PTGES2Q9H7Z7 377 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 OSER1Q9NX31 292 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 KCND3Q9UK17 655 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SLC27A6Q9Y2P4 619 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 GOLT1BQ9Y3E0 138 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 PLXNB2O15031 1838 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 OR2AT4A6NND4 320 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF726A6NNF4 738 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 CYTIPO60759 359 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 NME6O75414 186 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 CLDN9O95484 217 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 PRAMEF12O95522 483 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 NSG1P42857 185 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 RENBPP51606 427 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ARHGEF7Q14155 803 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 MEF2DQ14814 521 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 SCGB2B2Q4G0G5 96 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 PRRT3Q5FWE3 981 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 NSUN5P2Q63ZY6 315 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 SLC36A4Q6YBV0 504 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 MSANTD1Q6ZTZ1 278 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 SLC36A1Q7Z2H8 476 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 BBS1Q8NFJ9 593 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 OR4K1Q8NGD4 311 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 LGALS14Q8TCE9 139 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 DUSP19Q8WTR2 217 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 RGP1Q92546 391 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 PSMG2Q969U7 264 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 HMCESQ96FZ2 354 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 INSM2Q96T92 566 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 RSPO3Q9BXY4 272 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 MRPL17Q9NRX2 175 aaKnown RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 MRPS18AQ9NVS2 196 aaKnown RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 FAM120CQ9NX05 1096 aaKnown RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 CACNG4Q9UBN1 327 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF337Q9Y3M9 751 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 CARNS1A5YM72 827 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 KDM4EB2RXH2 506 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 BCAT2O15382 392 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 TMEM11P17152 192 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 GLP1RP43220 463 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 EPHB3P54753 998 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 EFNB1P98172 346 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 BIKQ13323 160 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 SLBPQ14493 270 aaKnown RBP eCLIP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF750Q32MQ0 723 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ZDHHC20Q5W0Z9 365 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ADNP2Q6IQ32 1131 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 PARGQ86W56 976 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 NPAS3Q8IXF0 933 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 OR56A3Q8NH54 315 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF671Q8TAW3 534 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 TCTN2Q96GX1 697 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 FCRL2Q96LA5 508 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 FCRL4Q96PJ5 515 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 ZPBPQ9BS86 351 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 GPR61Q9BZJ8 451 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 CHST6Q9GZX3 395 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 P2RY12Q9H244 342 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 BCO1Q9HAY6 547 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 RHOFQ9HBH0 211 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 GDF2Q9UK05 429 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-203ENST00000349748 SLC35A3Q9Y2D2 325 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 KCNIP3Q9Y2W7 256 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 CASP8AP2Q9UKL3 1982 aa9.85□□□□□ -0.83
CAPN3-203ENST00000349748 A0A1W2PRQ8 180 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 RNF222A6NCQ9 220 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ANTXRLA6NF34 631 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 RTCAO00442 366 aaKnown RBP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PIRO00625 290 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 FGF16O43320 207 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CLDN11O75508 207 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ATP1B1P05026 303 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CYBAP13498 195 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 EPORP19235 508 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 NME2P22392 152 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 MMP11P24347 488 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 DLSTP36957 453 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms