RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ANKRD9Q96BM1 317 aaPredicted RBP16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 NMNAT3Q96T66 252 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 ZFYVE21Q9BQ24 234 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 INPP5EQ9NRR6 644 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 UCKL1Q9NWZ5 548 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 A0A1W2PQ72 361 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 C7orf66A4D0T2 115 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 SELENOFO60613 162 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 HPXP02790 462 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 VSX2P58304 361 aaPredicted RBP16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 PSG6Q00889 435 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 ABHD13Q7L211 337 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 CAMKVQ8NCB2 501 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 SLC25A18Q9H1K4 315 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 LAMA1P25391 3075 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 A0A1W2PQF6 199 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 TNFSF14O43557 240 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 KIR2DS3Q14952 304 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 TMEM255AQ5JRV8 349 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 HES5Q5TA89 166 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 KIRREL2Q6UWL6 708 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 SLC22A18Q96BI1 424 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 SATB2Q9UPW6 733 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 TRBV2A0A0J9YWF9 115 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 TRABD2BA6NFA1 517 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 ACOD1A6NK06 481 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 GMDSO60547 372 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 RDH16O75452 317 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 TOXO94900 526 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 POU2F2P09086 479 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 SIRPAP78324 504 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 ERV3-1Q14264 604 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 LGALS14Q8TCE9 139 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 HAVCR2Q8TDQ0 301 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 SNX33Q8WV41 574 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 PIGKQ92643 395 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 RERGQ96A58 199 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 C1QTNF7Q9BXJ2 289 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 TCEAL2Q9H3H9 227 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 SFXN1Q9H9B4 322 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 C2orf42Q9NWW7 574 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 ANKRD10Q9NXR5 420 aa16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 DNAJB12Q9NXW2 375 aaKnown RBP16.63■□□□□ 0.25
PTP4A3-202ENST00000349124 LEUTXA8MZ59 168 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 PIN1P1O15428 100 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 FLRT2O43155 660 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 NOS1APO75052 506 aaPredicted RBP16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ENPP1P22413 925 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 SNTB2Q13425 540 aaKnown RBP16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 CDK5R1Q15078 307 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF613Q6PF04 617 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ELMOD2Q8IZ81 293 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 CMTM4Q8IZR5 234 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 CA13Q8N1Q1 262 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 MS4A15Q8N5U1 240 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 OR9A4Q8NGU2 314 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF671Q8TAW3 534 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 HMGB4Q8WW32 186 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 STACQ99469 402 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 GAS2L1Q99501 681 aaPredicted RBP16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 FKRPQ9H9S5 495 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 POT1Q9NUX5 634 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 CHRNA9Q9UGM1 479 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ING4Q9UNL4 249 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 NPFFR2Q9Y5X5 522 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 CACNA1CQ13936 2221 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 A0A087WV62 115 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 A6NCN8 305 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 URADA6NGE7 173 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 PRR32B1ATL7 298 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 EDNRAP25101 427 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 TAS2R43P59537 309 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ZSWIM7Q19AV6 140 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 GSG1Q2KHT4 349 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 RPL13AP3Q6NVV1 102 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF767PQ75MW2 155 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 GIMAP1Q8WWP7 306 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 GFI1Q99684 422 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 FAM60AQ9NP50 221 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 NOX4Q9NPH5 578 aa16.62■□□□□ 0.25
PTP4A3-202ENST00000349124 A0A1B0GVT2 93 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 H3BSH0 61 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 OGG1O15527 345 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 LINC01565O15544 149 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 FMO6PO60774 539 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 UBL3O95164 117 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 CELA2BP08218 269 aaPredicted RBP16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 CD53P19397 219 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 SLC6A6P31641 620 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 MMP15P51511 669 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 C19orf57Q0VDD7 668 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 ZBTB37Q5TC79 503 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF433Q8N7K0 673 aaPredicted RBP16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 OR6K6Q8NGW6 343 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 CTHRC1Q96CG8 243 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 RASD2Q96D21 266 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 SMIM19Q96E16 107 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 SPACA7Q96KW9 195 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 OBP2AQ9NY56 170 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms