RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 GMFGO60234 142 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 HCN1O60741 890 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 NUDT14O95848 222 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 CH25HO95992 272 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 HTR1AP08908 422 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.82
ECM1-201ENST00000346569 ALDH3B2P48448 385 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 PCYT1AP49585 367 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 ZNF362Q5T0B9 420 aaPredicted RBP9.96□□□□□ -0.82
ECM1-201ENST00000346569 RPL13AP3Q6NVV1 102 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 SMARCD3Q6STE5 483 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 ARSKQ6UWY0 536 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 CASP12Q6UXS9 341 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 RTL4Q6ZR62 310 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 MDGA2Q7Z553 956 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 OAFQ86UD1 273 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 PLCZ1Q86YW0 608 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 GPALPP1Q8IXQ4 340 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 SLC43A2Q8N370 569 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 LNX2Q8N448 690 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 LRRC17Q8N6Y2 441 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 TCEANCQ8N8B7 351 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 OR13C2Q8NGS9 318 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 OR51A7Q8NH64 312 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 POC1BQ8TC44 478 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 STK35Q8TDR2 534 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 GGHQ92820 318 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 TAAR8Q969N4 342 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 KIAA1143Q96AT1 154 aaPredicted RBP9.96□□□□□ -0.82
ECM1-201ENST00000346569 KTI12Q96EK9 354 aaPredicted RBP9.96□□□□□ -0.82
ECM1-201ENST00000346569 FER1L6-AS2Q96M78 137 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 IL4I1Q96RQ9 567 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 LHPPQ9H008 270 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 MCCC2Q9HCC0 563 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 MED17Q9NVC6 651 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 STMN3Q9NZ72 180 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 PPP4R1LQ9P1A2 415 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 BLOC1S6Q9UL45 172 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 TMED7Q9Y3B3 224 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 PCDHGB1Q9Y5G3 927 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 DOCK10Q96BY6 2186 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 DMXL2Q8TDJ6 3036 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 TRAV27A0A087WT01 109 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 TMEM72A0PK05 275 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 CLCA1A8K7I4 914 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 PTGES3LE9PB15 166 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 CDK2AP1O14519 115 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 SURF4O15260 269 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 MRPS14O60783 128 aaKnown RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 TRIM3O75382 744 aaPredicted RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 BGLAPP02818 100 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 HMGN1P05114 100 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 ASAH2BP0C7U1 165 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 SAGP10523 405 aaPredicted RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 ATP6V1B1P15313 513 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 JUNBP17275 347 aaPredicted RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 BMP7P18075 431 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 SLC15A1P46059 708 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 MAP2K6P52564 334 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 NR1H2P55055 460 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 RPS4XP62701 263 aaKnown RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 SNAPC1Q16533 368 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 ZNF74Q16587 644 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 PGGHGQ32M88 737 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 CLEC12AQ5QGZ9 265 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 PRAMEF20Q5VT98 475 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 C1QL3Q5VWW1 255 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 ZNF773Q6PK81 442 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 SPARTQ8N0X7 666 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 OR2T33Q8NG76 320 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 OR6S1Q8NH40 331 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 IPCEF1Q8WWN9 437 aaPredicted RBP9.95□□□□□ -0.82
ECM1-201ENST00000346569 PTDSS2Q9BVG9 487 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 TBC1D23Q9NUY8 699 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 CLN6Q9NWW5 311 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 SCN3BQ9NY72 215 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 PSORS1C1Q9UIG5 152 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 FBXL2Q9UKC9 423 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 ZNF337Q9Y3M9 751 aa9.95□□□□□ -0.82
ECM1-201ENST00000346569 TRAV36DV7A0A075B6V5 113 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 ZC3H12DA2A288 527 aaKnown RBP9.94□□□□□ -0.82
ECM1-201ENST00000346569 A8MVM7 634 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 SNPHO15079 494 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 SUSD5O60279 629 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 ENTPD6O75354 484 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 NDUFB2O95178 105 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 SNX4O95219 450 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 WT1P19544 449 aaPredicted RBP9.94□□□□□ -0.82
ECM1-201ENST00000346569 CCNA2P20248 432 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 PCMT1P22061 227 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 EEF1B2P24534 225 aaKnown RBP9.94□□□□□ -0.82
ECM1-201ENST00000346569 ADH6P28332 368 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 GRK5P34947 590 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 CD96P40200 585 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 PIGFQ07326 219 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 SRSF6Q13247 344 aaKnown RBP9.94□□□□□ -0.82
ECM1-201ENST00000346569 PLPPR5Q32ZL2 321 aa9.94□□□□□ -0.82
ECM1-201ENST00000346569 ANKDD1AQ495B1 522 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms