RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 A0A1B0GV90 55 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 TERTO14746 1132 aaKnown RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 ZNF821O75541 412 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 CSF1P09603 554 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 NDUFV2P19404 249 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 MANFP55145 182 aaKnown RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 MRPL58Q14197 206 aaKnown RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 ZNF620Q6ZNG0 422 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 OR6J1Q8NGC5 347 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 MED8Q96G25 268 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 SUSD3Q96L08 255 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 KRCC1Q9NPI7 259 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 TMEM100Q9NV29 134 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 UPB1Q9UBR1 384 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 POM121BA6NF01 834 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 CLDN7O95471 211 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 PMS2P2O95744 297 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 IFNGP01579 166 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 XPAP23025 273 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 ACVR1BP36896 505 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 CTSOP43234 321 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-201ENST00000342245 HTR5AP47898 357 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 ARF5P84085 180 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 CDKN3Q16667 212 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 POMGNT2Q8NAT1 580 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 C17orf47Q8NEP4 570 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 RNF141Q8WVD5 230 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 C4orf36Q96KX1 117 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 DMRT3Q9NQL9 472 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 WBP1LQ9NX94 342 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 ASH2LQ9UBL3 628 aa17.13■□□□□ 0.33
SMPD1-201ENST00000342245 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 OR2W5A6NFC9 320 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 GGT3PA6NGU5 568 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 SYT5O00445 386 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 CALCBP10092 127 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 NR2F1P10589 423 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 AKR1C2P52895 323 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 AKR1C1Q04828 323 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 DECR1Q16698 335 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 PRSS53Q2L4Q9 553 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 VWA2Q5GFL6 755 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 C11orf87Q6NUJ2 197 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 VRK3Q8IV63 474 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 OR56A3Q8NH54 315 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 SMPDL3AQ92484 453 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 SLC25A38Q96DW6 304 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 ZNF75AQ96N20 296 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 TBX5Q99593 518 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 EFCAB11Q9BUY7 163 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 C1orf198Q9H425 327 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 AK6Q9Y3D8 172 aaKnown RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 TMEM272A0A1B0GTI8 110 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 OR5H14A6NHG9 310 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 J3QLW9 94 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 OGG1O15527 345 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 SLC34A2O95436 690 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 ACTL6AO96019 429 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 ZNF14P17017 642 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 ZNF19P17023 458 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 DPP4P27487 766 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 PDHA2P29803 388 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 PPT1P50897 306 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 LBHQ53QV2 105 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 GPR142Q7Z601 462 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 BOLLQ8N9W6 283 aaKnown RBP17.12■□□□□ 0.33
SMPD1-201ENST00000342245 CHST14Q8NCH0 376 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 APMAPQ9HDC9 416 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 TDP1Q9NUW8 608 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 NOD1Q9Y239 953 aa17.12■□□□□ 0.33
SMPD1-201ENST00000342245 RBBP9O75884 186 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 GBAP04062 536 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PRG2P13727 222 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 ANXA11P50995 505 aaKnown RBP17.11■□□□□ 0.33
SMPD1-201ENST00000342245 B4GALNT1Q00973 533 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 SSX2Q16385 188 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PRPF38BQ5VTL8 546 aaKnown RBP17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PLBD1Q6P4A8 553 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 ZCCHC12Q6PEW1 402 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 SLCO4C1Q6ZQN7 724 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 NDUFAF7Q7L592 441 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 GLB1L2Q8IW92 636 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 SLC2A12Q8TD20 617 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 WDR34Q96EX3 536 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 GGACTQ9BVM4 153 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 WDR13Q9H1Z4 485 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 RCC2Q9P258 522 aaKnown RBP17.11■□□□□ 0.33
SMPD1-201ENST00000342245 ZMIZ1Q9ULJ6 1067 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 ETV7Q9Y603 341 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 IFITM5A6NNB3 132 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 BLOC1S5-TXNDC5H3BN57 136 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 AP4M1O00189 453 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms