RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TOX3O15405 576 aaPredicted RBP13.78□□□□□ -0.2
TPM3-208ENST00000341485 PLA2G10O15496 165 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 SOX30O94993 753 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 RBM34P42696 430 aaKnown RBP13.78□□□□□ -0.2
TPM3-208ENST00000341485 NR4A2P43354 598 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 SLC16A1P53985 500 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 STX4Q12846 297 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 OAFQ86UD1 273 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 OR1L3Q8NH93 324 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 NDC1Q9BTX1 674 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 YIPF2Q9BWQ6 316 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 MARCH7Q9H992 704 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 ADGRL4Q9HBW9 690 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 INPP5EQ9NRR6 644 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
TPM3-208ENST00000341485 CLDN16Q9Y5I7 305 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 MAU2Q9Y6X3 613 aa13.78□□□□□ -0.2
TPM3-208ENST00000341485 ARID1BQ8NFD5 2236 aaPredicted RBP13.77□□□□□ -0.2
TPM3-208ENST00000341485 CABIN1Q9Y6J0 2220 aa13.77□□□□□ -0.2
TPM3-208ENST00000341485 SPTBP11277 2137 aa13.77□□□□□ -0.2
TPM3-208ENST00000341485 ZDBF2Q9HCK1 2354 aa13.77□□□□□ -0.2
TPM3-208ENST00000341485 OR2W5A6NFC9 320 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 NPIPB9F8W1W9 429 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 CLDN4O14493 209 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 CTNSO60931 367 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 SBK2P0C263 348 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 HK1P19367 917 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 EVX1P49640 407 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 DUSP3P51452 185 aaPredicted RBP13.77□□□□□ -0.21
TPM3-208ENST00000341485 BTG2P78543 158 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 IGLV3-21P80748 117 aaPredicted RBP13.77□□□□□ -0.21
TPM3-208ENST00000341485 SQSTM1Q13501 440 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 FGFBP1Q14512 234 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 P2RY14Q15391 338 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 ZNF141Q15928 474 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.77□□□□□ -0.212e-17■□□□□ 10.2
TPM3-208ENST00000341485 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 RSBN1Q5VWQ0 802 aaPredicted RBP13.77□□□□□ -0.21
TPM3-208ENST00000341485 NR2C2APQ86WQ0 139 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 LSMEM1Q8N8F7 131 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 RCBTB1Q8NDN9 531 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 OR6F1Q8NGZ6 308 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 OR5W2Q8NH69 310 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.21
TPM3-208ENST00000341485 TRIM36Q9NQ86 728 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 PRTFDC1Q9NRG1 225 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 BAIAP2Q9UQB8 552 aa13.77□□□□□ -0.21
TPM3-208ENST00000341485 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 TFECO14948 347 aaPredicted RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 KHNYNO15037 678 aaKnown RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 MT-ND5P03915 603 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 GYPBP06028 91 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 ZNF3P17036 446 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 SLC6A6P31641 620 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 ZNF85Q03923 595 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 CRYZQ08257 329 aaKnown RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 ZNF267Q14586 743 aaPredicted RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 KIRREL2Q6UWL6 708 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 LINC00114Q6XXX2 140 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 TMPRSS9Q7Z410 1059 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 ZNF595Q8IYB9 648 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 FGF21Q9NSA1 209 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 VCANP13611 3396 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 MEIOCA2RUB1 952 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 GNB5O14775 395 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 PEPDP12955 493 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 MTNR1BP49286 362 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 E2F1Q01094 437 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 NNATQ16517 81 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 NDUFAF6Q330K2 333 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 TCEAL6Q6IPX3 200 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 MZT2AQ6P582 158 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 ARL9Q6T311 187 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 METAP1DQ6UB28 335 aaPredicted RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 ZNF574Q6ZN55 896 aaPredicted RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 RTL4Q6ZR62 310 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 RDH10Q8IZV5 341 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 CADM2Q8N3J6 435 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 OR4D9Q8NGE8 314 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 SMPDL3BQ92485 455 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 TCEAL3Q969E4 200 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 LOXL4Q96JB6 756 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 DGAT2Q96PD7 388 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 DEPDC7Q96QD5 511 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 PPIL3Q9H2H8 161 aaKnown RBP13.76□□□□□ -0.21
TPM3-208ENST00000341485 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 B3GAT2Q9NPZ5 323 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 UNC13CQ8NB66 2214 aa13.76□□□□□ -0.21
TPM3-208ENST00000341485 RP1P56715 2156 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 H3BMH7 237 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 AGRPO00253 132 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 ZNF749O43361 778 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 HLA-DQB1P01920 261 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 CFL1P23528 166 aaKnown RBP13.75□□□□□ -0.21
TPM3-208ENST00000341485 KIR2DL3P43628 341 aa13.75□□□□□ -0.21
TPM3-208ENST00000341485 RPS5P46782 204 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms