RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 MRPS7Q9Y2R9 242 aaKnown RBP9.49□□□□□ -0.89
LIMA1-201ENST00000341247 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 LAMA5O15230 3695 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 SERINC4A6NH21 518 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 TMEM150CB9EJG8 249 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 H7C1C5 153 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 PLA2G10O15496 165 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 SRPX2O60687 465 aaPredicted RBP9.49□□□□□ -0.89
LIMA1-201ENST00000341247 FMO6PO60774 539 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 TFP02787 698 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 ELK1P19419 428 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 LCN6P62502 163 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 FGFBP1Q14512 234 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 VWA2Q5GFL6 755 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 MTFR2Q6P444 385 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 GKN2Q86XP6 184 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 TMEM151BQ8IW70 566 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 SAMD12Q8N8I0 201 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 MOSPD2Q8NHP6 518 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 DEPDC7Q96QD5 511 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 HDHD2Q9H0R4 259 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 NUFIP1Q9UHK0 495 aaKnown RBP9.49□□□□□ -0.89
LIMA1-201ENST00000341247 GNG8Q9UK08 70 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 RASD1Q9Y272 281 aa9.49□□□□□ -0.89
LIMA1-201ENST00000341247 A0A0G2JMP0 313 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 A0A0X1KG70 313 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 MEIOCA2RUB1 952 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 OR2B3O76000 313 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 NSA2O95478 260 aaKnown RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 IFNGP01579 166 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 F13BP05160 661 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 KIR2DL3P43628 341 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 HTR3AP46098 478 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 GPR50Q13585 617 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 FHL1Q13642 323 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 SLC25A35Q3KQZ1 300 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF595Q8IYB9 648 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 UBQLNLQ8IYU4 475 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 OR4M2Q8NGB6 313 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 GHSRQ92847 366 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF524Q96C55 264 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 PDCD1LG2Q9BQ51 273 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 MED18Q9BUE0 208 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 SLC22A4Q9H015 551 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 NXF5Q9H1B4 397 aaKnown RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 NLKQ9UBE8 527 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 PLCL2Q9UPR0 1127 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 NDUFB2O95178 105 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 AQP2P41181 271 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 RPS27P42677 84 aaKnown RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 PPP3R1P63098 170 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 PAMR1Q6UXH9 720 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 APOOLQ6UXV4 268 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF550Q7Z398 422 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ABHD4Q8TB40 342 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 SNX33Q8WV41 574 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 GFM1Q96RP9 751 aaKnown RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ELF4Q99607 663 aaPredicted RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 PCDHGB2Q9Y5G2 931 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 A0A087WV48 116 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ELOA3DA6NLF2 546 aaPredicted RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 NUDT14O95848 222 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZP2Q05996 745 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 SF3B4Q15427 424 aaKnown RBP eCLIP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ELOA3BQ3SY89 546 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 TBRG1Q3YBR2 411 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ATAD3CQ5T2N8 411 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 VASH1Q7L8A9 365 aaPredicted RBP9.48□□□□□ -0.89
LIMA1-201ENST00000341247 SLC7A5P1Q8MH63 180 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF511Q8NB15 262 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ELOA3Q8NG57 546 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 OR6C4Q8NGE1 309 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 Q96M85 177 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 FOXN4Q96NZ1 517 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 TTYH2Q9BSA4 534 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 G6PC3Q9BUM1 346 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 ERVMER34-1Q9H9K5 563 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 NEK6Q9HC98 313 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 PRDM9Q9NQV7 894 aa9.48□□□□□ -0.89
LIMA1-201ENST00000341247 A6NL46 340 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 MBTPS2O43462 519 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 RPP14O95059 124 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 NME1P15531 152 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 SKP1P63208 163 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 CD83Q01151 205 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ACSM3Q53FZ2 586 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 LCN1P1Q5VSP4 162 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 RPL13AP3Q6NVV1 102 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ESPNLQ6ZVH7 1005 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF563Q8TA94 476 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 C3orf49Q96BT1 292 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 MOGAT1Q96PD6 335 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 KCNN2Q9H2S1 579 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 RPRD1BQ9NQG5 326 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ENAMQ9NRM1 1142 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF221Q9UK13 617 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms