RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 B3GNT4Q9C0J1 378 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MKRN2Q9H000 416 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SMOXQ9NWM0 555 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 C1orf123Q9NWV4 160 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RNF215Q9Y6U7 377 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RLFQ13129 1914 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FAM208BQ5VWN6 2430 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LOC100130705A0A1B0GUX0 176 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TVP23AA6NH52 213 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 B4DEV8 164 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PGCP20142 388 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CXCR1P25024 350 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EIF1P41567 113 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CHRNA4P43681 627 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MRPL19P49406 292 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DAP3P51398 398 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 BTN1A1Q13410 526 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MOGSQ13724 837 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DPY19L2P2Q6ZN68 376 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 COX15Q7KZN9 410 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EIF4E3Q8N5X7 224 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 C4orf32Q8N8J7 132 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RELL2Q8NC24 303 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR56B1Q8NGI3 324 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ANGPTL6Q8NI99 470 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 IGSF8Q969P0 613 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HSD17B14Q9BPX1 270 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM204Q9BSN7 226 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NDFIP1Q9BT67 221 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC17A9Q9BYT1 436 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ANKRD60Q9BZ19 345 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CHRNA10Q9GZZ6 450 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CDH20Q9HBT6 801 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FZD10Q9ULW2 581 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LCTP09848 1927 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM238LA0A1B0GVL6 79 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 A6NJY4 79 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TPP1O14773 563 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SMAD6O43541 496 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UGT1A9O60656 530 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 BPIP17213 487 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GGT1P19440 569 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAB3BP20337 219 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CD27P26842 260 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CX3CR1P49238 355 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ENTPD1P49961 510 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PPP1CAP62136 330 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DCDP81605 110 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EIF2B1Q14232 305 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 STEAP1BQ6NZ63 245 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ABHD15Q6UXT9 468 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NRROSQ86YC3 692 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PLPP6Q8IY26 295 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC43A3Q8NBI5 491 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35B2Q8TB61 432 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR5P2Q8WZ92 322 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HAS1Q92839 578 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SARAFQ96BY9 339 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TRMT2BQ96GJ1 504 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GPR22Q99680 433 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TSPAN10Q9H1Z9 355 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DPEP3Q9H4B8 488 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UGT1A7Q9HAW7 530 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UGT1A10Q9HAW8 530 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UGT1A8Q9HAW9 530 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAB18Q9NP72 206 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 BABAM2Q9NXR7 383 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ANKMY1Q9P2S6 941 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TFR2Q9UP52 801 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SSUH2Q9Y2M2 353 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR5H15A6NDH6 313 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR5H14A6NHG9 310 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR5H1A6NKK0 313 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PPP5D1E7EU14 171 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RFXAPO00287 272 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CPSF4O95639 269 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MT-CYBP00156 380 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DBIP07108 87 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 H2AFB2P0C5Z0 115 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UBE2G2P60604 165 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF155Q12901 538 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 IL24Q13007 206 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SPHARQ15513 63 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FUT11Q495W5 492 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MSS51Q4VC12 460 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CRTC2Q53ET0 693 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF805Q5CZA5 627 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ARSHQ5FYA8 562 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 B3GNTL1Q67FW5 361 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR2A2Q6IF42 318 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TSSK4Q6SA08 328 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PYCR2Q96C36 320 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CMBLQ96DG6 245 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PYURFQ96I23 114 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LRRC3BQ96PB8 259 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR6C1Q96RD1 312 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMPRSS5Q9H3S3 457 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 KCNK15Q9H427 330 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF71Q9NQZ8 489 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms