RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CCDC32Q9BV29 185 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 CDCA4Q9BXL8 241 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DPAGT1Q9H3H5 408 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 A4GALTQ9NPC4 353 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 ACOXLQ9NUZ1 547 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 EVA1BQ9NVM1 165 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 ASB6Q9NWX5 421 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 GRHPRQ9UBQ7 328 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 TMEM5Q9Y2B1 443 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 CDH10Q9Y6N8 788 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 SNRNP200O75643 2136 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 C4orf47A7E2U8 309 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 B4DXG7 233 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 SCDO00767 359 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 CT62P0C5K7 136 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 F8A1P23610 371 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 VAMP1P23763 118 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 PRPH2P23942 346 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 SLC6A6P31641 620 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 TAF13Q15543 124 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 TMEM69Q5SWH9 247 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 IL17RDQ8NFM7 739 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 CEP76Q8TAP6 659 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 SLC6A18Q96N87 628 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 B3GAT2Q9NPZ5 323 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 LHX9Q9NQ69 397 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 REV1Q9UBZ9 1251 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 TBC1D24Q9ULP9 559 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 DAPP1Q9UN19 280 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 DIMT1Q9UNQ2 313 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 LILRB3O75022 631 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 FZD7O75084 574 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 RGS9O75916 674 aaPredicted RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 ARSBP15848 533 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 HIST1H1CP16403 213 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 PRKCAP17252 672 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 TBXA2RP21731 343 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 HNRNPA2B1P22626 353 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 PTH2RP49190 550 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 PRKXP51817 358 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 DGCR2P98153 550 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 GALK2Q01415 458 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 ARHGAP19Q14CB8 494 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 IGSF11Q5DX21 431 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 ZNF782Q6ZMW2 699 aaPredicted RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 MEPCEQ7L2J0 689 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 GJD3Q8N144 294 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 OR4D9Q8NGE8 314 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 OR5H6Q8NGV6 325 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 OR2L8Q8NGY9 312 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 OR4C3Q8NH37 302 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 AKAP1Q92667 903 aaKnown RBP eCLIP7.61□□□□□ -1.19
HPS4-201ENST00000336873 MED30Q96HR3 178 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 RDH8Q9NYR8 311 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 CCDC59Q9P031 241 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 HEBP2Q9Y5Z4 205 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 IRGMA1A4Y4 181 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 SLC22A31A6NKX4 558 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 ARPC1BO15143 372 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 MRPS14O60783 128 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 STOMP27105 288 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 PITPNBP48739 271 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 ZNF79Q15937 498 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 CCDC58Q4VC31 144 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 OR7E24Q6IFN5 339 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 FBXO42Q6P3S6 717 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 RASSF6Q6ZTQ3 369 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 ZNF619Q8N2I2 560 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 FTMTQ8N4E7 242 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 TSTD1Q8NFU3 115 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 ABHD4Q8TB40 342 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 PMM1Q92871 262 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 METTL2AQ96IZ6 378 aaKnown RBP7.61□□□□□ -1.19
HPS4-201ENST00000336873 GPER1Q99527 375 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 FAM83CQ9BQN1 747 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 SRRQ9GZT4 340 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 AUNIPQ9H7T9 357 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 FAM60AQ9NP50 221 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 PLCXD1Q9NUJ7 323 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 C14orf105Q9NVL8 296 aa7.61□□□□□ -1.19
HPS4-201ENST00000336873 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 A0A1W2PPV9 198 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 C17orf105B2RV13 164 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 SPINT1O43278 529 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 HCRTR1O43613 425 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 GPR75O95800 540 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 IL1AP01583 271 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 EIF4EP06730 217 aaKnown RBP7.6□□□□□ -1.19
HPS4-201ENST00000336873 COL9A1P20849 921 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 GABRA5P31644 462 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 EVI2BP34910 448 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 UGT2B10P36537 528 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 CSNK1EP49674 416 aaKnown RBP7.6□□□□□ -1.19
HPS4-201ENST00000336873 TPMTP51580 245 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 ZNF33BQ06732 778 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 PDE7AQ13946 482 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 GRM7Q14831 915 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 LIN54Q6MZP7 749 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 SFXN4Q6P4A7 337 aa7.6□□□□□ -1.19
HPS4-201ENST00000336873 ZNF322Q6U7Q0 402 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms