RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 MTCL1Q9Y4B5 1905 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 PSMD9O00233 223 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 STOMP27105 288 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 MTNR1BP49286 362 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ARL14Q8N4G2 192 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 BOLLQ8N9W6 283 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 C17orf47Q8NEP4 570 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SMPDL3BQ92485 455 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 INTS12Q96CB8 462 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF764Q96H86 408 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 PTCHD1Q96NR3 888 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ABHD1Q96SE0 405 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ANKRD19PQ9H560 264 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 TBC1D29Q9UFV1 150 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 AK6Q9Y3D8 172 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 KCNMB2Q9Y691 235 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SPACA6W5XKT8 324 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 MDC1Q14676 2089 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 LRRK1Q38SD2 2015 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 TEX13CA0A0J9YWL9 993 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 AGR2O95994 175 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 FABP1P07148 127 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZGLP1P0C6A0 271 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF3P17036 446 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 RAB3BP20337 219 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 MNX1P50219 401 aaPredicted RBP15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 RPS21P63220 83 aaKnown RBP15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 SGCAQ16586 387 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 HSD17B12Q53GQ0 312 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 PRAMEF8Q5VWM4 474 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 PRAMEF7Q5VXH5 474 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 LYPD4Q6UWN0 246 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 ERMAPQ96PL5 475 aaPredicted RBP15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 C11orf49Q9H6J7 331 aa15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 THAP10Q9P2Z0 257 aaPredicted RBP15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 EXOGQ9Y2C4 368 aaKnown RBP15.27■□□□□ 0.04
CDC42EP4-201ENST00000335793 CDHR4A6H8M9 788 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 APOC1P02654 83 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 APODP05090 189 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 PEBP1P30086 187 aaKnown RBP15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 MEOX2P50222 304 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 AGFG1P52594 562 aaKnown RBP15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 ERVK-25P63136 954 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 SNRPNP63162 240 aaKnown RBP15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 SWI5Q1ZZU3 235 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 DCST2Q5T1A1 773 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 PRSS45Q7RTY3 260 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 OR52E2Q8NGJ4 325 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 OR6K6Q8NGW6 343 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 CCL4L1Q8NHW4 92 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 TNFRSF13CQ96RJ3 184 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 APOOQ9BUR5 198 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 GSX2Q9BZM3 304 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 FOLH1BQ9HBA9 442 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 XIRP2A4UGR9 3374 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 hCG_1807616A0A1W2PRN6 198 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 IGHA1P01876 353 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 LINC00271P0C7V0 271 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 PVRP15151 417 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 CCR6P51684 374 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 TIGD3Q6B0B8 471 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 ZNF485Q8NCK3 441 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 SDR9C7Q8NEX9 313 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 BADQ92934 168 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 GAL3ST3Q96A11 431 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 RERGQ96A58 199 aaPredicted RBP15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 CREB3L1Q96BA8 519 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 TIMM29Q9BSF4 260 aa15.27■□□□□ 0.03
CDC42EP4-201ENST00000335793 H0YC42 278 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 H3BSH0 61 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 OR10H2O60403 315 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 ADAM11O75078 769 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 POU3F2P20265 443 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 NNATQ16517 81 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 PRRT3Q5FWE3 981 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 ALKAL2Q6UX46 152 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 WDR88Q6ZMY6 472 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 MRGPREQ86SM8 312 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 HEXA-AS1Q9H8Q6 139 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 STARD5Q9NSY2 213 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 CLDND1Q9NY35 253 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 WSB2Q9NYS7 404 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 PHF11Q9UIL8 331 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 MAB21L2Q9Y586 359 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 URADA6NGE7 173 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 H7C2Y5 167 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 SIX6O95475 246 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 EML2O95834 649 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 RNF224P0DH78 156 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 VASPP50552 380 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 LGALSLQ3ZCW2 172 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 SFRP4Q6FHJ7 346 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 VN1R4Q7Z5H5 301 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 SHISA5Q8N114 240 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 C10orf53Q8N6V4 93 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 ORAI1Q96D31 301 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 GPR137Q96N19 417 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 SHARPINQ9H0F6 387 aa15.26■□□□□ 0.03
CDC42EP4-201ENST00000335793 CYSLTR2Q9NS75 346 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms