RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 MED22Q15528 200 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 TMEM44Q2T9K0 475 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 ENTPD8Q5MY95 495 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 C1orf94Q6P1W5 598 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 SLC22A16Q86VW1 577 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 TMEM156Q8N614 296 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 NUP43Q8NFH3 380 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 EFHD2Q96C19 240 aaPredicted RBP12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 PRRC1Q96M27 445 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 RASL10BQ96S79 203 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 UTP23Q9BRU9 249 aaKnown RBP12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 FNDC11Q9BVV2 318 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 PINK1Q9BXM7 581 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 OR51E2Q9H255 320 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 TRIM45Q9H8W5 580 aaPredicted RBP12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 FOLH1BQ9HBA9 442 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 ISYNA1Q9NPH2 558 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 NTMQ9P121 344 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 LIPT1Q9Y234 373 aa12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 LSM2Q9Y333 95 aaKnown RBP12.29□□□□□ -0.44
TUBB2A-201ENST00000333628 LOC100506127A0A0U1RQW1 187 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 OR5H15A6NDH6 313 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 KIAA0513O60268 411 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 COQ9O75208 318 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 LGI1O95970 557 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 IFNA8P32881 189 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 SSR4P51571 173 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 DCAF7P61962 342 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 OC90Q02509 493 aaPredicted RBP12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 TP53BP2Q13625 1128 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 SPHARQ15513 63 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 KLHL22Q53GT1 634 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 SLC6A19Q695T7 634 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 CADM3Q8N126 398 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 PARP16Q8N5Y8 322 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 NANOGP1Q8N7R0 232 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 C17orf47Q8NEP4 570 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 SETD6Q8TBK2 473 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 LCORQ96JN0 433 aaPredicted RBP12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 VSTM2LQ96N03 204 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 CHCHD6Q9BRQ6 235 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 NUAK2Q9H093 628 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 NXF5Q9H1B4 397 aaKnown RBP12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 OR51I1Q9H343 314 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 DIMT1Q9UNQ2 313 aaKnown RBP12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 GPR55Q9Y2T6 319 aaPredicted RBP12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 SHANK1Q9Y566 2161 aa12.28□□□□□ -0.44
TUBB2A-201ENST00000333628 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CDK2AP1O14519 115 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 ENTPD6O75354 484 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 HSMCR30P0CW71 290 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CT45A8P0DMV1 189 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CT45A9P0DMV2 189 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 POU1F1P28069 291 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SOX3P41225 446 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CYB561P49447 251 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 TNFSF10P50591 281 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SMSP52788 366 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 PRR5P85299 388 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 TSTQ16762 297 aaKnown RBP12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 PLEKHN1Q494U1 663 aaPredicted RBP12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CYP27C1Q4G0S4 372 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CT45A2Q5DJT8 189 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 RPS26P11Q5JNZ5 115 aaPredicted RBP12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SPINK14Q6IE38 97 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 OPN5Q6U736 354 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 IL20RBQ6UXL0 311 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 DEF8Q6ZN54 512 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 Q6ZS92 163 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CCDC190Q86UF4 302 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 ZNF227Q86WZ6 799 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 Q8NA96 180 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SLC22A8Q8TCC7 542 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SLC7A13Q8TCU3 470 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 ASB15Q8WXK1 588 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 RAB8BQ92930 207 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 GIMAP5Q96F15 307 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 TXNDC15Q96J42 360 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 OPALINQ96PE5 141 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SIGLEC12Q96PQ1 595 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CENPOQ9BU64 300 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 ZCCHC3Q9NUD5 404 aaKnown RBP12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 LRFN1Q9P244 771 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 RHCGQ9UBD6 479 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 ZNF229Q9UJW7 825 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 STUB1Q9UNE7 303 aa12.27□□□□□ -0.44
TUBB2A-201ENST00000333628 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 H3BN98 237 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 SEMA7AO75326 666 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 NEURL1O76050 574 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 AGR2O95994 175 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 APOA1P02647 267 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 OR12D1P0DN82 309 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 GRK5P34947 590 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 PCYT1AP49585 367 aa12.26□□□□□ -0.45
TUBB2A-201ENST00000333628 RPS26P62854 115 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms