RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 OVCA2Q8WZ82 227 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 ECHDC3Q96DC8 303 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 GFOD1Q9NXC2 390 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 WNT6Q9Y6F9 365 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 CCSO14618 274 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 LATO43561 262 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 OR1F1O43749 312 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 REM1O75628 298 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 C1orf105O95561 183 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 LGI1O95970 557 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 NTSP30990 170 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 RPL3P39023 403 aaKnown RBP11.01□□□□□ -0.65
LIMK2-202ENST00000333611 GPR4P46093 362 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 PRAMEF14Q5SWL7 426 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 OR6T1Q8NGN1 323 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 ZNF582Q96NG8 517 aaPredicted RBP11.01□□□□□ -0.65
LIMK2-202ENST00000333611 KCNJ15Q99712 375 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 GPA33Q99795 319 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 NTNG1Q9Y2I2 539 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 LSM2Q9Y333 95 aaKnown RBP11.01□□□□□ -0.65
LIMK2-202ENST00000333611 TRPM7Q96QT4 1865 aa11.01□□□□□ -0.65
LIMK2-202ENST00000333611 FAM170BA6NMN3 283 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 FAAHO00519 579 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 PRF1P14222 555 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 BTCP35070 178 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 FAM71E1Q6IPT2 247 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 RPTNQ6XPR3 784 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 DNAAF1Q8NEP3 725 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 CNTNAP3BQ96NU0 1288 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 HHIPQ96QV1 700 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 ZNF350Q9GZX5 532 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 FBXW2Q9UKT8 454 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 HYAL3O43820 417 aaPredicted RBP11□□□□□ -0.65
LIMK2-202ENST00000333611 SOX30O94993 753 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 RB1P06400 928 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 TYRP14679 529 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 CNR1P21554 472 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SSR2P43308 183 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 NDUFA6P56556 154 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 ILKQ13418 452 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 RNF212Q495C1 297 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 LY6G5CQ5SRR4 150 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 ZNF697Q5TEC3 545 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SFXN4Q6P4A7 337 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 NXPE4Q6UWF7 544 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 BEST3Q8N1M1 668 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 BMPERQ8N8U9 685 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 OR9A1PQ8NGU1 263 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 OR56A3Q8NH54 315 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SLC35G5Q96KT7 338 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 PARP12Q9H0J9 701 aaKnown RBP11□□□□□ -0.65
LIMK2-202ENST00000333611 TMEM38AQ9H6F2 299 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 IGLV3-16A0A075B6K0 115 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 TMEM218A2RU14 115 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 A6NLC8 198 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 OR6C76A6NM76 312 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 HOXA2O43364 376 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 CLN5O75503 358 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 NCBP2P52298 156 aaKnown RBP eCLIP11□□□□□ -0.65
LIMK2-202ENST00000333611 TRAM1Q15629 374 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 KHDRBS2Q5VWX1 349 aaKnown RBP11□□□□□ -0.65
LIMK2-202ENST00000333611 COMTD1Q86VU5 262 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 C17orf64Q86WR6 236 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 FBXO15Q8NCQ5 510 aaPredicted RBP11□□□□□ -0.65
LIMK2-202ENST00000333611 TMIEQ8NEW7 156 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SMPDL3AQ92484 453 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SLC38A1Q9H2H9 487 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 SYNPO2LQ9H987 977 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 AHSPQ9NZD4 102 aa11□□□□□ -0.65
LIMK2-202ENST00000333611 A0A0A6YYC8 382 aaPredicted RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 I3L1I5 382 aaPredicted RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 SLC25A12O75746 678 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 SDHAP31040 664 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 PTH2RP49190 550 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 ART1P52961 327 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 ZNF311Q5JNZ3 666 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 EXOSC6Q5RKV6 272 aaKnown RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 ETFRF1Q6IPR1 90 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 CCDC116Q8IYX3 515 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 AMER3Q8N944 861 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 THOC3Q96J01 351 aaKnown RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 SLC46A2Q9BY10 475 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 ISG20L2Q9H9L3 353 aaKnown RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 SLC25A19Q9HC21 320 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 FZD3Q9NPG1 666 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 WSB2Q9NYS7 404 aaPredicted RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 DNAJB11Q9UBS4 358 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 PLSCR5A0PG75 271 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 PLPP1O14494 284 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 MAGEB4O15481 346 aaPredicted RBP10.99□□□□□ -0.65
LIMK2-202ENST00000333611 STX11O75558 287 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 GNSP15586 552 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 TIMP2P16035 220 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 RPE65Q16518 533 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 FAM76BQ5HYJ3 339 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 SEMA6DQ8NFY4 1073 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 THAP4Q8WY91 577 aa10.99□□□□□ -0.65
LIMK2-202ENST00000333611 LYSMD1Q96S90 227 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms