RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SCAMP1O15126 338 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 PCDH8O95206 1070 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 LYPD3O95274 346 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 THBS1P07996 1170 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 SIRPAP78324 504 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 AMZ1Q400G9 498 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 GRASPQ7Z6J2 395 aaPredicted RBP21.78■■□□□ 1.08
TSKU-201ENST00000333090 ZNF433Q8N7K0 673 aaPredicted RBP21.78■■□□□ 1.08
TSKU-201ENST00000333090 SLC25A18Q9H1K4 315 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 CXXC1Q9P0U4 656 aaPredicted RBP21.78■■□□□ 1.08
TSKU-201ENST00000333090 PIPOXQ9P0Z9 390 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 GNG8Q9UK08 70 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 OGG1O15527 345 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 NARSO43776 548 aaKnown RBP21.78■■□□□ 1.08
TSKU-201ENST00000333090 RNGTTO60942 597 aaKnown RBP21.78■■□□□ 1.08
TSKU-201ENST00000333090 ZNF234Q14588 700 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 SNX33Q8WV41 574 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 KLHL15Q96M94 604 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 TNFRSF13CQ96RJ3 184 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 NOX3Q9HBY0 568 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 NANSQ9NR45 359 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 HAO2Q9NYQ3 351 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 AKAP7Q9P0M2 348 aaPredicted RBP21.78■■□□□ 1.08
TSKU-201ENST00000333090 KCNE5Q9UJ90 142 aa21.78■■□□□ 1.08
TSKU-201ENST00000333090 PTHLHP12272 177 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 EPCAMP16422 314 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 ZP3P21754 424 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 EDNRAP25101 427 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 CAPZA2P47755 286 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 CLDN12P56749 244 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 ID2Q02363 134 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 TRMT12Q53H54 448 aaKnown RBP21.77■■□□□ 1.08
TSKU-201ENST00000333090 OVCH1Q7RTY7 1134 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 ZNF619Q8N2I2 560 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 SDR9C7Q8NEX9 313 aa21.77■■□□□ 1.08
TSKU-201ENST00000333090 WDR89Q96FK6 387 aaPredicted RBP21.77■■□□□ 1.08
TSKU-201ENST00000333090 PLSCR5A0PG75 271 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 POM121CA8CG34 1229 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 NID1P14543 1247 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 POU3F2P20265 443 aaPredicted RBP21.77■■□□□ 1.07
TSKU-201ENST00000333090 PSMB10P40306 273 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 HTR4Q13639 388 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 TUSC1Q2TAM9 212 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 FAM199XQ6PEV8 388 aaPredicted RBP21.77■■□□□ 1.07
TSKU-201ENST00000333090 OR2L13Q8N349 312 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 FAM71CQ8NEG0 241 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 OR52E2Q8NGJ4 325 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 SLC2A12Q8TD20 617 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 PAWRQ96IZ0 340 aaKnown RBP21.77■■□□□ 1.07
TSKU-201ENST00000333090 CXorf58Q96LI9 332 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 TOX2Q96NM4 488 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 REG4Q9BYZ8 158 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 ZNF350Q9GZX5 532 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 NOX4Q9NPH5 578 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 KLHL9Q9P2J3 617 aa21.77■■□□□ 1.07
TSKU-201ENST00000333090 ECDO95905 644 aaPredicted RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 DBIP07108 87 aaKnown RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 ANXA7P20073 488 aaKnown RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 PEBP1P30086 187 aaKnown RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 NUP62P37198 522 aaPredicted RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 PSMA6P60900 246 aaKnown RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 POU4F2Q12837 409 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 FCRLAQ7L513 359 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 OR4K13Q8NH42 304 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 SLC27A6Q9Y2P4 619 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 TUBAL3A6NHL2 446 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 GABARAPH6UMI1 98 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 KRT33AO76009 404 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 ZNF888P0CJ79 500 aaPredicted RBP21.76■■□□□ 1.07
TSKU-201ENST00000333090 TYRP1P17643 537 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 AP3S2P59780 193 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 BAMBIQ13145 260 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 DCST2Q5T1A1 773 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 SFRP5Q5T4F7 317 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 FIGNL1Q6PIW4 674 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 ARSKQ6UWY0 536 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 SARGQ9BW04 601 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 LIN7BQ9HAP6 207 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 POT1Q9NUX5 634 aa21.76■■□□□ 1.07
TSKU-201ENST00000333090 ACOD1A6NK06 481 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 PTP4A3O75365 173 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 FGF19O95750 216 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 ADH1CP00326 375 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 SRMP19623 302 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 NFYAP23511 347 aaPredicted RBP21.75■■□□□ 1.07
TSKU-201ENST00000333090 MAGEB1P43366 347 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 TSFMP43897 325 aaKnown RBP21.75■■□□□ 1.07
TSKU-201ENST00000333090 OR5M10Q6IEU7 315 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 GLDNQ6ZMI3 551 aaPredicted RBP21.75■■□□□ 1.07
TSKU-201ENST00000333090 MFSD9Q8NBP5 474 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 SLC25A38Q96DW6 304 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 RAB11FIP5Q9BXF6 653 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 MFSD2BA6NFX1 497 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 ATP6V1G2-DDX39BF2Z307 99 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 IFNGP01579 166 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 ACTA2P62736 377 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 ACTG2P63267 376 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 LINC00303Q3SY05 128 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 ALKAL2Q6UX46 152 aa21.75■■□□□ 1.07
TSKU-201ENST00000333090 OR4K14Q8NGD5 310 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms