RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 PROCRQ9UNN8 238 aa12.52□□□□□ -0.41
LIMS1-201ENST00000332345 TMEM72A0PK05 275 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 A8MVM7 634 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 NDUFAB1O14561 156 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 FRS3O43559 492 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 GCM2O75603 506 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 DCTN3O75935 186 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 LGI1O95970 557 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 CGAP01215 116 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 IFNA14P01570 189 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 YES1P07947 543 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 SSTR2P30874 369 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 KIR2DL3P43628 341 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 PCYT1AP49585 367 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 OR2B6P58173 313 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 NCALDP61601 193 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 SLC35A1P78382 337 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 HOXC5Q00444 222 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 SORDQ00796 357 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 DMTNQ08495 405 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 RASGEF1BQ0VAM2 473 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 DUSP7Q16829 419 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 GLIPR1L2Q4G1C9 344 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 HACD2Q6Y1H2 254 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 GDF7Q7Z4P5 450 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 ZNF610Q8N9Z0 462 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 SMYD1Q8NB12 490 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 OR52E4Q8NGH9 312 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 ABHD3Q8WU67 409 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 LRRC37BQ96QE4 947 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 GPATCH1Q9BRR8 931 aaKnown RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 NAA11Q9BSU3 229 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 RSPO3Q9BXY4 272 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-201ENST00000332345 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 TMEM27Q9HBJ8 222 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 FANCFQ9NPI8 374 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 ELOVL5Q9NYP7 299 aa12.51□□□□□ -0.41
LIMS1-201ENST00000332345 IGHV3-15A0A0B4J1V0 119 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 ELOA3DA6NLF2 546 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-201ENST00000332345 CYTIPO60759 359 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 PNMTP11086 282 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 KCNJ5P48544 419 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 ELOA3BQ3SY89 546 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 ULK3Q6PHR2 472 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 ANKS4BQ8N8V4 417 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 ELOA3Q8NG57 546 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 STK35Q8TDR2 534 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 C3orf49Q96BT1 292 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 OPN3Q9H1Y3 402 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-201ENST00000332345 C12orf10Q9HB07 376 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 GALNT8Q9NY28 637 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 FAM53CQ9NYF3 392 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 KLHL13Q9P2N7 655 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 TESQ9UGI8 421 aaKnown RBP12.5□□□□□ -0.41
LIMS1-201ENST00000332345 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 UNC79Q9P2D8 2635 aa12.5□□□□□ -0.41
LIMS1-201ENST00000332345 ELOVL7A1L3X0 281 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 CCT8L1PA6NM43 557 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 FAM220BPB1ANY3 271 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 SMAD9O15198 467 aaKnown RBP12.49□□□□□ -0.41
LIMS1-201ENST00000332345 OPN1SWP03999 348 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 GPIP06744 558 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 FESP07332 822 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 AGTR1P30556 359 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 IDUAP35475 653 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 CPOXP36551 454 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 CD79BP40259 229 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 NUDT2P50583 147 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 PDK3Q15120 406 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 GKAP1Q5VSY0 366 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-201ENST00000332345 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 ZNF474Q6S9Z5 364 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-201ENST00000332345 BEND4Q6ZU67 534 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 ATG4DQ86TL0 474 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-201ENST00000332345 TUSC5Q8IXB3 177 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 ZNF295-AS1Q8N0V1 137 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 FAM222BQ8WU58 562 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 SLC47A1Q96FL8 570 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 TAPBPLQ9BX59 468 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 BCO1Q9HAY6 547 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 CMTM6Q9NX76 183 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 NDRG3Q9UGV2 375 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 BAG5Q9UL15 447 aa12.49□□□□□ -0.41
LIMS1-201ENST00000332345 A0A1B0GWA3 101 aa12.48□□□□□ -0.41
LIMS1-201ENST00000332345 ZC3H12DA2A288 527 aaKnown RBP12.48□□□□□ -0.41
LIMS1-201ENST00000332345 ZNF724A8MTY0 619 aa12.48□□□□□ -0.41
LIMS1-201ENST00000332345 GPR171O14626 319 aa12.48□□□□□ -0.41
LIMS1-201ENST00000332345 FMO6PO60774 539 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms