RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SNAP47Q5SQN1 464 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 CBLN3Q6UW01 205 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 IL20RBQ6UXL0 311 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 GPALPP1Q8IXQ4 340 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 Q8N402 240 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 OR13C5Q8NGS8 318 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 TP53INP1Q96A56 240 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 KIAA1143Q96AT1 154 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 RNF31Q96EP0 1072 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 SMAD5Q99717 465 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 SOSTQ9BQB4 213 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC22A4Q9H015 551 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 NXF5Q9H1B4 397 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 B3GAT2Q9NPZ5 323 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 CUTCQ9NTM9 273 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 RNF215Q9Y6U7 377 aa13.62□□□□□ -0.23
CLCNKA-201ENST00000331433 IGKV1D-42A0A075B6H8 117 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 TMEM150CB9EJG8 249 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 PLA2G10O15496 165 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 PLPP2O43688 288 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 CCNKO75909 580 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 OR2B3O76000 313 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC2A2P11168 524 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 MTNR1BP49286 362 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC37A1P57057 533 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 OR1D5P58170 312 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 OR10A3P58181 314 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 SERTAD2Q14140 314 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ZSWIM7Q19AV6 140 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 C14orf28Q4W4Y0 310 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 APOOLQ6UXV4 268 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 UTS2BQ765I0 119 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 CEACAM19Q7Z692 300 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 PHOSPHO1Q8TCT1 267 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ZDHHC12Q96GR4 267 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 PGLYRP3Q96LB9 341 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 UBE2ZQ9H832 354 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 GMEB2Q9UKD1 530 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ICAM5Q9UMF0 924 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 C4orf47A7E2U8 309 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 HPGDP15428 266 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 F8A1P23610 371 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 HNRNPKP61978 463 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ERVK-25P63136 954 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 MZT2AQ6P582 158 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ABHD4Q8TB40 342 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 SLC2A12Q8TD20 617 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 RASD2Q96D21 266 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 KLHDC3Q9BQ90 382 aa13.61□□□□□ -0.23
CLCNKA-201ENST00000331433 ALPK2Q86TB3 2170 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 A0A1W2PRG6 482 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 SEC14L5O43304 696 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 NR4A2P43354 598 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 NXPH1P58417 271 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 ACTC1P68032 377 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 ACTA1P68133 377 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 LYPD4Q6UWN0 246 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 PRR22Q8IZ63 422 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 MOSPD2Q8NHP6 518 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNF524Q96C55 264 aa13.6□□□□□ -0.23
CLCNKA-201ENST00000331433 TMEM221A6NGB7 291 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ELOA3DA6NLF2 546 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 FAM25AB3EWG3 89 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 FAM25CB3EWG5 89 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 FAM25GB3EWG6 89 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 GMFGO60234 142 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 OR7A10O76100 309 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 MYF5P13349 255 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ELK1P19419 428 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 CFL1P23528 166 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 EFNA3P52797 238 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 POU4F2Q12837 409 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ELOA3BQ3SY89 546 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 RSBN1Q5VWQ0 802 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 TRIQKQ629K1 86 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 TMEM151BQ8IW70 566 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 DTX3Q8N9I9 347 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ELOA3Q8NG57 546 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 GHSRQ92847 366 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 GAL3ST4Q96RP7 486 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 CNN2Q99439 309 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 UBQLN4Q9NRR5 601 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 ZNF337Q9Y3M9 751 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 OR6C68A6NDL8 312 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 H3BMH7 237 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 BLOC1S5-TXNDC5H3BN57 136 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 PPM1BO75688 479 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 UBL4AP11441 157 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 KIR2DL3P43628 341 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 TAS2R43P59537 309 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 SKP2Q13309 424 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 LCN1P1Q5VSP4 162 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 FNDC7Q5VTL7 733 aa13.59□□□□□ -0.23
CLCNKA-201ENST00000331433 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms