RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 C7orf72A4D263 438 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 SCAMP2O15127 329 aaKnown RBP12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 ITM2AO43736 263 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 ERCC1P07992 297 aaPredicted RBP12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 ADRA2CP18825 462 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 FPR2P25090 351 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 SHC1P29353 583 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 SFTPDP35247 375 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 PSMD4P55036 377 aaKnown RBP12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 EMX2Q04743 252 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 HSPB3Q12988 150 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 CPTPQ5TA50 214 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 TMEM107Q6UX40 140 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 RBMS3Q6XE24 437 aaKnown RBP12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 LILRA2Q8N149 483 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 SLC43A2Q8N370 569 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF781Q8N8C0 355 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 OR7G2Q8NG99 324 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 CLHC1Q8NHS4 586 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 NANPQ8TBE9 248 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 UBASH3BQ8TF42 649 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 UBE2FQ969M7 185 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 TLCD1Q96CP7 247 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 ELP4Q96EB1 424 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 GLIPR2Q9H4G4 154 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 Q9N2J8 555 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 G6PC2Q9NQR9 355 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 NOP53Q9NZM5 478 aaKnown RBP12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 KLHL9Q9P2J3 617 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 C19orf53Q9UNZ5 99 aaPredicted RBP12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
CTHRC1-201ENST00000330295 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 TRPC5OSA6NMA1 111 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 PRSS23O95084 383 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 TFP02787 698 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 GAAP10253 952 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 ARRB2P32121 409 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 PRR5P85299 388 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 BST1Q10588 318 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 PDE7AQ13946 482 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 EFNB3Q15768 340 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 LSM12Q3MHD2 195 aaKnown RBP12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 CYP27C1Q4G0S4 372 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 SZRD1Q7Z422 152 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF100Q8IYN0 542 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 LRRC34Q8IZ02 419 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 OR2L13Q8N349 312 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 SIGLECL1Q8N7X8 197 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 RNF217Q8TC41 542 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 TAF15Q92804 592 aaKnown RBP eCLIP12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 C3orf30Q96M34 536 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 PSD2Q9BQI7 771 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 C1orf50Q9BV19 199 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 TMPRSS13Q9BYE2 586 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 NARFLQ9H6Q4 476 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 SLC52A3Q9NQ40 469 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 HAO1Q9UJM8 370 aa12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 FBXO9Q9UK97 447 aaPredicted RBP12.81□□□□□ -0.36
CTHRC1-201ENST00000330295 EPPK1P58107 5090 aaKnown RBP12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 LOC100653049A0A140TA62 436 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 C9JVG2 144 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 LYNX1G3V0Z9 82 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 KRT34O76011 436 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ANGPTL1O95841 491 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 LYNX1P0DP58 116 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 LBPP18428 481 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ENPP1P22413 925 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 WDR4P57081 412 aaKnown RBP12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ADIPOQQ15848 244 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 DECR1Q16698 335 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 PLPPR5Q32ZL2 321 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ANKRD26P1Q6NSI1 321 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 LEG1Q6P5S2 330 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF551Q7Z340 670 aaPredicted RBP12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF775Q96BV0 537 aaPredicted RBP12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 TBL1XR1Q9BZK7 514 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 AKTIPQ9H8T0 292 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 VIPAS39Q9H9C1 493 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 HHATLQ9HCP6 504 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 CA10Q9NS85 328 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 ASIC5Q9NY37 505 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 PCDHGB4Q9UN71 923 aa12.8□□□□□ -0.36
CTHRC1-201ENST00000330295 IGHV3-15A0A0B4J1V0 119 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 A0A1W2PRB8 838 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 UPK1AO00322 258 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 TIMM23O14925 209 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 HDAC3O15379 428 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 KCNH1O95259 989 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 RNASE1P07998 156 aaKnown RBP12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 OR4A8P0C604 315 aa12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 SAGP10523 405 aaPredicted RBP12.79□□□□□ -0.36
CTHRC1-201ENST00000330295 PRKAG1P54619 331 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms