RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 A0A0B4J293 547 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 A0A0G2JK05 382 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 FITM1A5D6W6 292 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 TLCD2A6NGC4 264 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 H0YIG0 161 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 PRKNO60260 465 aaPredicted RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 PPM1BO75688 479 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 OR7A10O76100 309 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 TRAPPC2P0DI81 140 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 TRAPPC2BP0DI82 140 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 MYL9P24844 172 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 CD1CP29017 333 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 DDOSTP39656 456 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 NRG3P56975 720 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 SERTAD2Q14140 314 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 TCTE1Q5JU00 501 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 SFXN4Q6P4A7 337 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 IL20RBQ6UXL0 311 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 DPY19L2P2Q6ZN68 376 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 ZNF687Q8N1G0 1237 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 FAM71CQ8NEG0 241 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 OR51L1Q8NGJ5 315 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 RNF31Q96EP0 1072 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 ZC3HAV1LQ96H79 300 aaKnown RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 FRMD6Q96NE9 622 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 KCNJ15Q99712 375 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 PELOQ9BRX2 385 aaKnown RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 PDE7BQ9NP56 450 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 SLC2A4RGQ9NR83 387 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 EXTL2Q9UBQ6 330 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 RBMX2Q9Y388 322 aaKnown RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 GON4LQ3T8J9 2241 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 IGKV1D-42A0A075B6H8 117 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 SRFP11831 508 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 MAOBP27338 520 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 OR10A3P58181 314 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 GXYLT1Q4G148 440 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 TP53I3Q53FA7 332 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 ACSM3Q53FZ2 586 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 FNDC7Q5VTL7 733 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 ZNF440Q8IYI8 595 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 Q8N9G6 341 aaPredicted RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 GATSQ8NAP1 163 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 POMGNT2Q8NAT1 580 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 NPEPL1Q8NDH3 523 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 OR13C5Q8NGS8 318 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 ZNRF4Q8WWF5 429 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 CNN2Q99439 309 aaKnown RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 DDOQ99489 341 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 CYSLTR2Q9NS75 346 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 LANCL2Q9NS86 450 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 RBFOX1Q9NWB1 397 aaKnown RBP13.34□□□□□ -0.27
TPM3-206ENST00000330188 ZNF337Q9Y3M9 751 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 N6AMT1Q9Y5N5 214 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 MAU2Q9Y6X3 613 aa13.34□□□□□ -0.27
TPM3-206ENST00000330188 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 METTL12A8MUP2 240 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 A8MV72 311 aaPredicted RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 IMPA2O14732 288 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 MAGEB4O15481 346 aaPredicted RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 OGG1O15527 345 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 OR2T7P0C7T2 308 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 FAM157BP0CG42 384 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 RPL4P36578 427 aaKnown RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 NAA10P41227 235 aaPredicted RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 RPS4XP62701 263 aaKnown RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 QPRTQ15274 297 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 CD226Q15762 336 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 TBRG1Q3YBR2 411 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 MED25Q71SY5 747 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 LRRC28Q86X40 367 aaPredicted RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 SLC35F2Q8IXU6 374 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 ZNF321PQ8N8H1 164 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 OR2T27Q8NH04 317 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 ZPLD1Q8TCW7 415 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 GHSRQ92847 366 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 NRIP3Q9NQ35 241 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 ENAMQ9NRM1 1142 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 RASD1Q9Y272 281 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 A0A0G2JMP0 313 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 A0A0X1KG70 313 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 A0A1W2PRG6 482 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 ARPC3O15145 178 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 LYRM1O43325 122 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 OIP5O43482 229 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 EIF4EP06730 217 aaKnown RBP13.33□□□□□ -0.28
TPM3-206ENST00000330188 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 IFITM2Q01629 132 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 DEFB133Q30KQ1 61 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 GLCCI1Q86VQ1 547 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 SYS1Q8N2H4 156 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 MS4A15Q8N5U1 240 aa13.33□□□□□ -0.28
TPM3-206ENST00000330188 TEX19Q8NA77 164 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms