RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 KITP10721 976 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 APOBEC1P41238 236 aaKnown RBP10.87□□□□□ -0.67
TPM3-204ENST00000323144 MVDP53602 400 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 SLC16A1P53985 500 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 OR2B6P58173 313 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 KCNJ10P78508 379 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 DMTNQ08495 405 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 TIMM23BQ5SRD1 257 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 FBXW9Q5XUX1 488 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 MTDHQ86UE4 582 aaKnown RBP10.87□□□□□ -0.67
TPM3-204ENST00000323144 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 VRK2Q86Y07 508 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 ADGRG3Q86Y34 549 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 LRRC34Q8IZ02 419 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 OR9I1Q8NGQ6 314 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 OIT3Q8WWZ8 545 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 HTRA1Q92743 480 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 ARL8AQ96BM9 186 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 ZHX1-C8orf76Q96EF9 292 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 AURKBQ96GD4 344 aaPredicted RBP10.87□□□□□ -0.67
TPM3-204ENST00000323144 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.87□□□□□ -0.67
TPM3-204ENST00000323144 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 HDGFL3Q9Y3E1 203 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 GPR45Q9Y5Y3 372 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 SLC25A15Q9Y619 301 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
TPM3-204ENST00000323144 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 SNNO75324 88 aaPredicted RBP10.86□□□□□ -0.67
TPM3-204ENST00000323144 PGM3O95394 542 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 BCHEP06276 602 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 GKN3PP0CG01 181 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 ETFAP13804 333 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 TACR3P29371 465 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 POLR2HP52434 150 aaKnown RBP10.86□□□□□ -0.67
TPM3-204ENST00000323144 PPP2R2BQ00005 443 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 EPS8Q12929 822 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 PDK3Q15120 406 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 SLC9B1Q4ZJI4 515 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 HHATQ5VTY9 493 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 C11orf71Q6IPW1 123 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 DNM1P46Q6ZS02 220 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 VPS37AQ8NEZ2 397 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 VPS33AQ96AX1 596 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 TRNT1Q96Q11 434 aaKnown RBP10.86□□□□□ -0.67
TPM3-204ENST00000323144 OR52E6Q96RD3 313 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 MDFIQ99750 246 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 RLIMQ9NVW2 624 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 TAS2R16Q9NYV7 291 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 FLVCR1Q9Y5Y0 555 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 CUBNO60494 3623 aa10.86□□□□□ -0.67
TPM3-204ENST00000323144 CSPG4Q6UVK1 2322 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 CCT8L1PA6NM43 557 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 E7EQL1 145 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 M0R1B8 84 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 PDLIM1O00151 329 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 FRS3O43559 492 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 DNPH1O43598 174 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 SNUPNO95149 360 aaKnown RBP10.85□□□□□ -0.67
TPM3-204ENST00000323144 NR2F1P10589 423 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 PRG2P13727 222 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 IRX1P78414 480 aaPredicted RBP10.85□□□□□ -0.67
TPM3-204ENST00000323144 LGALS3BPQ08380 585 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 TSPO2Q5TGU0 170 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 LRRC74BQ6ZQY2 392 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 ZNF621Q6ZSS3 439 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 SPATA19Q7Z5L4 167 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 CMIPQ8IY22 773 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 MUCL1Q96DR8 90 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 TRMT61AQ96FX7 289 aaKnown RBP10.85□□□□□ -0.67
TPM3-204ENST00000323144 HS6ST2Q96MM7 605 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 CACNG6Q9BXT2 260 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 AMBRA1Q9C0C7 1298 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 ALG2Q9H553 416 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 SLC7A10Q9NS82 523 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 ASB6Q9NWX5 421 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 CISD1Q9NZ45 108 aaKnown RBP10.85□□□□□ -0.67
TPM3-204ENST00000323144 TMEM181Q9P2C4 612 aa10.85□□□□□ -0.67
TPM3-204ENST00000323144 ZNF443Q9Y2A4 671 aaPredicted RBP10.85□□□□□ -0.67
TPM3-204ENST00000323144 SONP18583 2426 aaKnown RBP10.85□□□□□ -0.67
TPM3-204ENST00000323144 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 IGHV4-30-2A0A087WSY4 118 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 A0A096LNT2 108 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 CIB4A0PJX0 185 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 CFAP73A6NFT4 308 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 FAAHO00519 579 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 RFXANKO14593 260 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 HDAC3O15379 428 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 CD40P25942 277 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 H3F3AP84243 136 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 BNIP2Q12982 314 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 OR7A5Q15622 319 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 ETFDHQ16134 617 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 GABRA6Q16445 453 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 PDCD4Q53EL6 469 aaKnown RBP10.84□□□□□ -0.67
TPM3-204ENST00000323144 OTUD3Q5T2D3 398 aaPredicted RBP10.84□□□□□ -0.67
TPM3-204ENST00000323144 AP1ARQ63HQ0 302 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 NXNQ6DKJ4 435 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 TRIML2Q8N7C3 387 aa10.84□□□□□ -0.67
TPM3-204ENST00000323144 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms