RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ZNF223Q9UK11 482 aaPredicted RBP16.52■□□□□ 0.23
PRKCB-202ENST00000321728 D6RAR5 112 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SIGLEC5O15389 551 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SPINT1O43278 529 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 HOXB3P14651 431 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-202ENST00000321728 RAB3AP20336 220 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 EDNRAP25101 427 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF136P52737 540 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 DEFB103AP81534 67 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SLC48A1Q6P1K1 146 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 OR51L1Q8NGJ5 315 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 BPIFA2Q96DR5 249 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 ARSGQ96EG1 525 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF558Q96NG5 402 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 PITHD1Q9GZP4 211 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-202ENST00000321728 XKR8Q9H6D3 395 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 NOX4Q9NPH5 578 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SPHK2Q9NRA0 654 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 POT1Q9NUX5 634 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 GNG8Q9UK08 70 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF780BQ9Y6R6 833 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF879B4DU55 563 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SPDEFO95238 335 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 F3P13726 295 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SRMP19623 302 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 HSD17B2P37059 387 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 NAA10P41227 235 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-202ENST00000321728 CAPZA2P47755 286 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 ARFIP1P53367 373 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 RPS11P62280 158 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SIRPAP78324 504 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 DEFA5Q01523 94 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 STX4Q12846 297 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 TMEM35AQ53FP2 167 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SNX33Q8WV41 574 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 MS4A6EQ96DS6 147 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 SLC25A38Q96DW6 304 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 S100A16Q96FQ6 103 aaKnown RBP16.51■□□□□ 0.23
PRKCB-202ENST00000321728 LRIG1Q96JA1 1093 aa16.51■□□□□ 0.23
PRKCB-202ENST00000321728 LRRK1Q38SD2 2015 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 IGKV1-8A0A0C4DH67 115 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 ANKRD20A5PA0PJZ0 165 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 UBE2QL1A1L167 161 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 OGG1O15527 345 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF749O43361 778 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SLC2A5P22732 501 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 HTR2AP28223 471 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 BCL6P41182 706 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 DLX5P56178 289 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 MESP2Q0VG99 397 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 CAMK1Q14012 370 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 OR1Q1Q15612 314 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SHEQ5VZ18 495 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 FAM111BQ6SJ93 734 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 NAXDQ8IW45 347 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 GIMAP5Q96F15 307 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SLC38A3Q99624 504 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SLC6A20Q9NP91 592 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 FBXL3Q9UKT7 428 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 ACOD1A6NK06 481 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 DUXAA6NLW8 204 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 IFITM5A6NNB3 132 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 VEGFDO43915 354 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 CALCRP30988 508 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 PSMB10P40306 273 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SLC39A11Q8N1S5 342 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SYNPRQ8TBG9 265 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 PNPLA2Q96AD5 504 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 CMTM3Q96MX0 182 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 NPAS1Q99742 590 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 MENTQ9BUN1 341 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 PRDM7Q9NQW5 492 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 OPN4Q9UHM6 478 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 CES1P1Q9UKY3 287 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 SIGLEC7Q9Y286 467 aa16.5■□□□□ 0.23
PRKCB-202ENST00000321728 HMSDA8MTL9 139 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 PYCARD-AS1I3L0S3 204 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 C8AP07357 584 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF35P13682 527 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 PTH2RP49190 550 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 P2RX1P51575 399 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 H2BFSP57053 126 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 UBE2MP61081 183 aaKnown RBP16.49■□□□□ 0.23
PRKCB-202ENST00000321728 CLVS2Q5SYC1 327 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 RPL13AP3Q6NVV1 102 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 ABHD17CQ6PCB6 329 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 CLRN3Q8NCR9 226 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 MRPS24Q96EL2 167 aaKnown RBP16.49■□□□□ 0.23
PRKCB-202ENST00000321728 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
PRKCB-202ENST00000321728 EVA1AQ9H8M9 152 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 USP36Q9P275 1121 aaKnown RBP16.49■□□□□ 0.23
PRKCB-202ENST00000321728 ZNF175Q9Y473 711 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 NDUFB6O95139 128 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 LDOC1O95751 146 aaPredicted RBP16.49■□□□□ 0.23
PRKCB-202ENST00000321728 CBX7O95931 251 aa16.49■□□□□ 0.23
PRKCB-202ENST00000321728 RLN1P04808 185 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms