RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 USP51Q70EK9 711 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 TMEM99Q8N816 258 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 TOR1AIP2Q8NFQ8 470 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 EDAQ92838 391 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 C19orf43Q9BQ61 176 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
TOP3A-201ENST00000321105 DKKL1Q9UK85 242 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 HSPB11Q9Y547 144 aa10.16□□□□□ -0.78
TOP3A-201ENST00000321105 ZAR1LA6NP61 321 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 PRKAR1BP31321 381 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 LSSP48449 732 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 CTBP2P56545 445 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 C9orf135Q5VTT2 229 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 SLC25A25Q6KCM7 469 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 FAM199XQ6PEV8 388 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 RASSF6Q6ZTQ3 369 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 ZAR1Q86SH2 424 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 OR2T4Q8NH00 348 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 TRMT10AQ8TBZ6 339 aaKnown RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 PITX2Q99697 317 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 PRUNE2Q8WUY3 3088 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 A0A0G2JMZ2 1700 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 ZNF701M0R085 212 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 GABRPO00591 440 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 SNRPBP14678 240 aaKnown RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 PLGLB1Q02325 96 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 ATXN7L3Q14CW9 347 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 ZNF322Q6U7Q0 402 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 MAMDC2Q7Z304 686 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 SLC35F2Q8IXU6 374 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 RDH10Q8IZV5 341 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 ZNF283Q8N7M2 679 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 TMEM52Q8NDY8 209 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 GPR119Q8TDV5 335 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 NR4A3Q92570 626 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 TMEM41AQ96HV5 264 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 CTSFQ9UBX1 484 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 C19orf25Q9UFG5 118 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 SUSD2Q9UGT4 822 aa10.15□□□□□ -0.78
TOP3A-201ENST00000321105 NYNRINQ9P2P1 1898 aaKnown RBP10.15□□□□□ -0.78
TOP3A-201ENST00000321105 CDHR4A6H8M9 788 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 EFCAB7A8K855 629 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 SELENOFO60613 162 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 HCKP08631 526 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 ITGA5P08648 1049 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 H2BFMP0C1H6 154 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF20P17024 532 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 PEBP1P30086 187 aaKnown RBP10.15□□□□□ -0.79
TOP3A-201ENST00000321105 CLRN1P58418 232 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 ACY1Q03154 408 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 CCINQ13939 588 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 C4orf46Q504U0 113 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 ARTNQ5T4W7 220 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 BICRALQ6AI39 1079 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 PHC2Q8IXK0 858 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 GPALPP1Q8IXQ4 340 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 RBM24Q9BX46 236 aaKnown RBP10.15□□□□□ -0.79
TOP3A-201ENST00000321105 NT5DC2Q9H857 520 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 FBXL3Q9UKT7 428 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 ING4Q9UNL4 249 aa10.15□□□□□ -0.79
TOP3A-201ENST00000321105 TRIM3O75382 744 aaPredicted RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 UPK1BO75841 260 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 S1PR1P21453 382 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 MAP2K3P46734 347 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 CAPZBP47756 277 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 PCBP4P57723 403 aaKnown RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 LANCL3Q6ZV70 420 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 LINC00346Q8IVM7 164 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 FOXRED2Q8IWF2 684 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 CELF2-AS1Q8N7Q2 184 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 EPHA6Q9UF33 1036 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 SLCO1B1Q9Y6L6 691 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 IDSB3KWA1 339 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 ALOX12BO75342 701 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 RGS9O75916 674 aaPredicted RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 BCKDHBP21953 392 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 VAMP1P23763 118 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 GPR85P60893 370 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 RELAQ04206 551 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 ZIC1Q15915 447 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 LRRC37A5PQ49AS3 106 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 ESPNLQ6ZVH7 1005 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 STT3BQ8TCJ2 826 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 ZMAT3Q9HA38 289 aaKnown RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 DIABLOQ9NR28 239 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 EIF3KQ9UBQ5 218 aaKnown RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 MUTYHQ9UIF7 546 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 A0A0B4J203 849 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 F5H5K5 113 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 HIST1H1CP16403 213 aaKnown RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 SNU13P55769 128 aaKnown RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 SNTB2Q13425 540 aaKnown RBP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.14□□□□□ -0.79
TOP3A-201ENST00000321105 KLHL26Q53HC5 615 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 TMEM69Q5SWH9 247 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 FCRL6Q6DN72 434 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 RPL13AP3Q6NVV1 102 aa10.14□□□□□ -0.79
TOP3A-201ENST00000321105 KIRREL2Q6UWL6 708 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms