RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GDF15Q99988 308 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 LMAN2LQ9H0V9 348 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 C14orf105Q9NVL8 296 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 SCML1Q9UN30 329 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 IDSB3KWA1 339 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 SEMA4FO95754 770 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 IFNA16P05015 189 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 MAOAP21397 527 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 GDI2P50395 445 aaKnown RBP16.01■□□□□ 0.15
COL9A1-201ENST00000320755 ERVK-25P63136 954 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 BTBD16Q32M84 506 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 PRR23CQ6ZRP0 262 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 PRSS45Q7RTY3 260 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 UBE2Q1Q7Z7E8 422 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 ZPLD1Q8TCW7 415 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 TRIM2Q9C040 744 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 BEX1Q9HBH7 125 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 HSPB11Q9Y547 144 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 MAU2Q9Y6X3 613 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 A0A0G2JK05 382 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 TRBV2A0A0J9YWF9 115 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 SELENOFO60613 162 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 SLC43A1O75387 559 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ATF1P18846 271 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 S1PR1P21453 382 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 RAB38P57729 211 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 YIF1BQ5BJH7 314 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 EXOSC6Q5RKV6 272 aaKnown RBP16■□□□□ 0.15
COL9A1-201ENST00000320755 FAM205BPQ63HN1 556 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF671Q8TAW3 534 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 RASD2Q96D21 266 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 PELI1Q96FA3 418 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 LMF1Q96S06 567 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 GSDMCQ9BYG8 508 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 INPP5EQ9NRR6 644 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ENTPD2Q9Y5L3 495 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 BLOC1S5-TXNDC5H3BN57 136 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 CSTAP01040 98 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 GAAP10253 952 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 NPR2P20594 1047 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 GALP22466 123 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 EDNRAP25101 427 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 PTBP1P26599 531 aaKnown RBP eCLIP16■□□□□ 0.15
COL9A1-201ENST00000320755 NRG3P56975 720 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 FHL1Q13642 323 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 DMKNQ6E0U4 476 aaPredicted RBP16■□□□□ 0.15
COL9A1-201ENST00000320755 ARHGAP11AQ6P4F7 1023 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 RNF44Q7L0R7 432 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 POT1Q9NUX5 634 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ACOXLQ9NUZ1 547 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 MRPL15Q9P015 296 aaKnown RBP16■□□□□ 0.15
COL9A1-201ENST00000320755 CLEC1BQ9P126 229 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ERVK-19Q9WJR5 959 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 CACNG2Q9Y698 323 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 A0A0A6YYJ9 748 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 H3BSH0 61 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ARHGEF9O43307 516 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 NDUFB2O95178 105 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 GABRG2P18507 467 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 AHCYP23526 432 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 GZMKP49863 264 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 TAS2R43P59537 309 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 DGCR2P98153 550 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 RIN1Q13671 783 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 MCATQ8IVS2 390 aaKnown RBP16■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF433Q8N7K0 673 aaPredicted RBP16■□□□□ 0.15
COL9A1-201ENST00000320755 DEDD2Q8WXF8 326 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ASB12Q8WXK4 309 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 CDCA3Q99618 268 aaPredicted RBP16■□□□□ 0.15
COL9A1-201ENST00000320755 KLHL21Q9UJP4 597 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 CYP8B1Q9UNU6 501 aa16■□□□□ 0.15
COL9A1-201ENST00000320755 ERP29P30040 261 aaKnown RBP15.99■□□□□ 0.15
COL9A1-201ENST00000320755 SLC6A1P30531 599 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 PON3Q15166 354 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 ULK3Q6PHR2 472 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 NPSR1Q6W5P4 371 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 BMPERQ8N8U9 685 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 AKAP1Q92667 903 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL9A1-201ENST00000320755 TRIM63Q969Q1 353 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 SGTBQ96EQ0 304 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 HSPA12BQ96MM6 686 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 CNN2Q99439 309 aaKnown RBP15.99■□□□□ 0.15
COL9A1-201ENST00000320755 FBRSQ9HAH7 460 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 MKKSQ9NPJ1 570 aaPredicted RBP15.99■□□□□ 0.15
COL9A1-201ENST00000320755 WDR87Q6ZQQ6 2873 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 SCO2O43819 266 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 SYPP08247 313 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 GBX2P52951 348 aaPredicted RBP15.99■□□□□ 0.15
COL9A1-201ENST00000320755 FCN2Q15485 313 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 TIGD4Q8IY51 512 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 TCTE3Q8IZS6 198 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 DEFB119Q8N690 84 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 TSSK2Q96PF2 358 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 SLC25A18Q9H1K4 315 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.99■□□□□ 0.15
COL9A1-201ENST00000320755 TEKT2Q9UIF3 430 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 ST6GALNAC2Q9UJ37 374 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF222Q9UK12 451 aa15.99■□□□□ 0.15
COL9A1-201ENST00000320755 FBXL21Q9UKT6 434 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms