RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 KLHL4Q9C0H6 718 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 VCX3BQ9H321 246 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 MEPEQ9NQ76 525 aaPredicted RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF71Q9NQZ8 489 aaPredicted RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 USE1Q9NZ43 259 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 RPH3AQ9Y2J0 694 aaPredicted RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 MAGED1Q9Y5V3 778 aaPredicted RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 TRAV36DV7A0A075B6V5 113 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 PDLIM1O00151 329 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 SOCS2O14508 198 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 HPRP00739 348 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 ADAP00813 363 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF24P17028 368 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 IL11P20809 199 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 PRKACGP22612 351 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 OMPP47874 163 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 GFRA1P56159 465 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 RAC1P63000 192 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 PMP22Q01453 160 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 EGR4Q05215 589 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 WIPI1Q5MNZ9 446 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-201ENST00000320054 OTUD3Q5T2D3 398 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-201ENST00000320054 POMZP3Q6PJE2 187 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 C19orf48Q6RUI8 117 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 TMPRSS11FQ6ZWK6 438 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 PRICKLE2Q7Z3G6 844 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 ZER1Q7Z7L7 766 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 EXD3Q8N9H8 876 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 OR9Q2Q8NGE9 314 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 OR5M1Q8NGP8 315 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 GNPDA2Q8TDQ7 276 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 DDIT4LQ96D03 193 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 BPIFA2Q96DR5 249 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 SFXN2Q96NB2 322 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 UBL7Q96S82 380 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-201ENST00000320054 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 COQ10BQ9H8M1 238 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 AP4B1Q9Y6B7 739 aa12.28□□□□□ -0.44
PRPF18-201ENST00000320054 GJE1A6NN92 205 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ENO4A6NNW6 628 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 EI24O14681 340 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 TFECO14948 347 aaPredicted RBP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 KLF4O43474 513 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 OR2T1O43869 369 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 PIP5K1CO60331 668 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 HCN1O60741 890 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 GASTP01350 101 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 IGHG3P01860 377 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CRYABP02511 175 aaKnown RBP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ALPLP05186 524 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CELA3AP09093 270 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 IFI30P13284 250 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ZNF26P17031 533 aaPredicted RBP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CCNA2P20248 432 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 GSTM3P21266 225 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 TCEA1P23193 301 aaKnown RBP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 VHLP40337 213 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 GSSP48637 474 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 DAPP51397 102 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ALDH3A2P51648 485 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CRYZQ08257 329 aaKnown RBP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 COX10Q12887 443 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 LRRC36Q1X8D7 754 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 NADK2Q4G0N4 442 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 SYT14P1Q58G82 188 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 NHSL2Q5HYW2 709 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CD300LDQ6UXZ3 194 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ATG16L2Q8NAA4 619 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 AQP11Q8NBQ7 271 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 PFN4Q8NHR9 129 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 LIPHQ8WWY8 451 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
PRPF18-201ENST00000320054 WBP1Q96G27 269 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CNTNAP3BQ96NU0 1288 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 TAAR6Q96RI8 345 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 CNTNAP3Q9BZ76 1288 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 VCXQ9H320 206 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ZNF556Q9HAH1 456 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 C20orf141Q9NUB4 165 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 KIF17Q9P2E2 1029 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 HDGFL3Q9Y3E1 203 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ZNF337Q9Y3M9 751 aa12.27□□□□□ -0.45
PRPF18-201ENST00000320054 ZC3H12DA2A288 527 aaKnown RBP12.26□□□□□ -0.45
PRPF18-201ENST00000320054 H0YJX3 145 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 KPNA4O00629 521 aaPredicted RBP12.26□□□□□ -0.45
PRPF18-201ENST00000320054 FZD7O75084 574 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 AHSA1O95433 338 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 ACTL6AO96019 429 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 FPR3P25089 353 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 ALDH6A1Q02252 535 aaKnown RBP12.26□□□□□ -0.45
PRPF18-201ENST00000320054 TSPAN31Q12999 210 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 BCL2A1Q16548 175 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 CMPK2Q5EBM0 449 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 P3H2Q8IVL5 708 aa12.26□□□□□ -0.45
PRPF18-201ENST00000320054 SIAH3Q8IW03 269 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms