RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SDF2Q99470 211 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF649Q9BS31 505 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 C20orf141Q9NUB4 165 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 TMEM5Q9Y2B1 443 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 TCRBV16S1A1N1A0A5B0 115 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 MFSD2BA6NFX1 497 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 M0R233 179 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SOCS6O14544 535 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 PRODHO43272 600 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SULT1A3P0DMM9 295 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SULT1A4P0DMN0 295 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 DRD5P21918 477 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 LTBRP36941 435 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 KIAA1024LP59773 190 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 COX10Q12887 443 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 KIR2DS3Q14952 304 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 MRPL2Q5T653 305 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 ABHD13Q7L211 337 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 LINC00518Q8N0U6 118 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF527Q8NB42 609 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 AVL9Q8NBF6 648 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 CAMKVQ8NCB2 501 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 OR51A7Q8NH64 312 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SPRYD4Q8WW59 207 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 GIMAP1Q8WWP7 306 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SCARF2Q96GP6 870 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 OR2M2Q96R28 347 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 UBL7Q96S82 380 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SERINC2Q96SA4 455 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SECISBP2Q96T21 854 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 DPAGT1Q9H3H5 408 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 METTL17Q9H7H0 456 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 ISYNA1Q9NPH2 558 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 MRPS18AQ9NVS2 196 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 USP36Q9P275 1121 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 LIPT1Q9Y234 373 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SIRT4Q9Y6E7 314 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 OR10H2O60403 315 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 HLA-DPB1P04440 258 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 ST6GAL1P15907 406 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SHC1P29353 583 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 NUP62P37198 522 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 NLRC3Q7RTR2 1065 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 KLBQ86Z14 1044 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 OR4N2Q8NGD1 307 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 OR51G2Q8NGK0 314 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 WDR89Q96FK6 387 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 SARGQ9BW04 601 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 CACNG6Q9BXT2 260 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 ISG20L2Q9H9L3 353 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 TNFRSF10DQ9UBN6 386 aa14.35□□□□□ -0.11
SHROOM1-201ENST00000319854 WDFY3Q8IZQ1 3526 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 A0A0A6YYC8 382 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 I3L1I5 382 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 HRKO00198 91 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 KCNJ13O60928 360 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 PROS1P07225 676 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 THEGLP0DJG4 465 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 GCGRP47871 477 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 RPS7P62081 194 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 LRFN4Q6PJG9 635 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 CPOQ8IVL8 374 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SIAH3Q8IW03 269 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 GNPDA2Q8TDQ7 276 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF764Q96H86 408 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 PTCHD1Q96NR3 888 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 KCNE5Q9UJ90 142 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 ADAM30Q9UKF2 790 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 DUXAA6NLW8 204 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SAGP10523 405 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 THBS2P35442 1172 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 OMPP47874 163 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 PITPNBP48739 271 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 MAZP56270 477 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 NHLRC3Q5JS37 347 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 PLBD1Q6P4A8 553 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 TFAP2EQ6VUC0 442 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 WDR88Q6ZMY6 472 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 MOAP1Q96BY2 351 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SGTBQ96EQ0 304 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SFXN2Q96NB2 322 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 DDOQ99489 341 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 MTHFD2LQ9H903 347 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC22A7Q9Y694 548 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 A6NCN8 305 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 C2CD4DB7Z1M9 353 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SIGLEC5O15389 551 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SSNA1O43805 119 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 APBB3O95704 486 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 MRPL3P09001 348 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 IFNGR2P38484 337 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 HHEXQ03014 270 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 SIGLEC14Q08ET2 396 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 TSPAN31Q12999 210 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 ZSWIM7Q19AV6 140 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 DCST2Q5T1A1 773 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 ATRAIDQ6UW56 229 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 OAFQ86UD1 273 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 CYB561A3Q8NBI2 242 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 CHIAQ9BZP6 476 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms