RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 S100A3P33764 101 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.41
RPP40-201ENST00000319533 CCR4P51679 360 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 SLC16A1P53985 500 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 CSNK2A1P68400 391 aaPredicted RBP12.52□□□□□ -0.41
RPP40-201ENST00000319533 TMEM249Q2WGJ8 235 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 ARHGAP11BQ3KRB8 267 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 SYT14P1Q58G82 188 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 TMCO5AQ8N6Q1 288 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 FAM71CQ8NEG0 241 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 OR5AK3PQ8NH89 298 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
RPP40-201ENST00000319533 TMEM234Q8WY98 164 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
RPP40-201ENST00000319533 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 TNFRSF13CQ96RJ3 184 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 CACNG6Q9BXT2 260 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 ZNF350Q9GZX5 532 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 INTS9Q9NV88 658 aaKnown RBP12.52□□□□□ -0.41
RPP40-201ENST00000319533 AIG1Q9NVV5 245 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 EMC3Q9P0I2 261 aa12.52□□□□□ -0.41
RPP40-201ENST00000319533 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.41
RPP40-201ENST00000319533 RNF103-CHMP3A0A140T963 221 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 PRSS51A0A1B0GVH4 220 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 H7C417 338 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 SULT2B1O00204 365 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 ANKRD28O15084 1053 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 STX11O75558 287 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CSTAP01040 98 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 ALDOCP09972 364 aaKnown RBP12.51□□□□□ -0.41
RPP40-201ENST00000319533 PTNP21246 168 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 MATN1P21941 496 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CD40P25942 277 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
RPP40-201ENST00000319533 NTF4P34130 210 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 PGM1P36871 562 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 APOBEC1P41238 236 aaKnown RBP12.51□□□□□ -0.41
RPP40-201ENST00000319533 NUDT6P53370 316 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 NME5P56597 212 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CBX1P83916 185 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 VLDLRP98155 873 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 MERTKQ12866 999 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 SPANXN4Q5MJ08 99 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CLEC2AQ6UVW9 174 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 C6orf120Q7Z4R8 191 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CLECL1Q8IZS7 167 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 SLC35G5Q96KT7 338 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CCDC106Q9BWC9 280 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 MALT1Q9UDY8 824 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
RPP40-201ENST00000319533 SVEP1Q4LDE5 3571 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 FAM234BA2RU67 622 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 PDLIM1O00151 329 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 GPR171O14626 319 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 RAD51DO75771 328 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 CPSF4O95639 269 aaKnown RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 PMS2P2O95744 297 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 IDO1P14902 403 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 SLC25A16P16260 332 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 UFM1P61960 85 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 RPS26P62854 115 aaKnown RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 GPR68Q15743 365 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 GABRA6Q16445 453 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 MAPK14Q16539 360 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 FAM174BQ3ZCQ3 159 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 C1QTNF12Q5T7M4 302 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 ZNF544Q6NX49 715 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 KLHL17Q6TDP4 642 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 B3GLCTQ6Y288 498 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 EIF3MQ7L2H7 374 aaKnown RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 ANKRD46Q86W74 232 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 MUC15Q8N387 334 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 GLB1L3Q8NCI6 653 aaPredicted RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 CKAP2Q8WWK9 683 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 C7orf26Q96N11 449 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 AMBRA1Q9C0C7 1298 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 SAP130Q9H0E3 1048 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 ASB6Q9NWX5 421 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 TAS2R16Q9NYV7 291 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 MKLN1Q9UL63 735 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 NOSIPQ9Y314 301 aaKnown RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
RPP40-201ENST00000319533 SPIN1Q9Y657 262 aaPredicted RBP12.5□□□□□ -0.41
RPP40-201ENST00000319533 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
RPP40-201ENST00000319533 KIAA0513O60268 411 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
RPP40-201ENST00000319533 AGR2O95994 175 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 F12P00748 615 aaPredicted RBP12.49□□□□□ -0.41
RPP40-201ENST00000319533 IGHV3-9P01782 118 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 ITGA5P08648 1049 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 UBTFL6P0CB48 400 aaPredicted RBP12.49□□□□□ -0.41
RPP40-201ENST00000319533 UQCRC2P22695 453 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 THBS2P35442 1172 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 CHI3L1P36222 383 aaPredicted RBP12.49□□□□□ -0.41
RPP40-201ENST00000319533 ZNF83P51522 516 aa12.49□□□□□ -0.41
RPP40-201ENST00000319533 GNGT1P63211 74 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms