RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SAGP10523 405 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 IFI30P13284 250 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 GSSP48637 474 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 LRRC17Q8N6Y2 441 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 TEX19Q8NA77 164 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 ACOT11Q8WXI4 607 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 ZBTB8AQ96BR9 441 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 MRGPRX4Q96LA9 322 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 DHRS1Q96LJ7 313 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 OR5B2Q96R09 309 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 SEC14L4Q9UDX3 406 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 NPIPA1Q9UND3 350 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 MED31Q9Y3C7 131 aa13.91□□□□□ -0.18
PDLIM5-202ENST00000318007 FAAHO00519 579 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 CH25HO95992 272 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 PNMTP11086 282 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 HOXB6P17509 224 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 CLDN20P56880 219 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 SMIM11AP58511 58 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 ZIK1Q3SY52 487 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 FAM109AQ8N4B1 249 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 CISD2Q8N5K1 135 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 PIGQQ9BRB3 760 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 SVILO95425 2214 aa13.9□□□□□ -0.18
PDLIM5-202ENST00000318007 CACNA1BQ00975 2339 aa13.9□□□□□ -0.19
PDLIM5-202ENST00000318007 CDC42EP2O14613 210 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 MAKP20794 623 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 DAPP51397 102 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 SLC10A1Q14973 349 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 C3orf33Q6P1S2 294 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 PGBD2Q6P3X8 592 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 MBOAT2Q6ZWT7 520 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 ZER1Q7Z7L7 766 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 Q8NA96 180 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 MOGAT1Q96PD6 335 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 FUZQ9BT04 418 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 TNFSF11O14788 317 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 APOBEC1P41238 236 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 B3GALT5-AS1P59052 145 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 GLYR1Q49A26 553 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 CMPK2Q5EBM0 449 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 HIPK1Q86Z02 1210 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 GTPBP8Q8N3Z3 284 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 PIGXQ8TBF5 258 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 TAAR8Q969N4 342 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 BPIFA2Q96DR5 249 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 MPP4Q96JB8 637 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 POLR2J2Q9GZM3 115 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 POLR2J3Q9H1A7 115 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 SLC25A18Q9H1K4 315 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 RYDENQ9NUL5 291 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 SPTA1P02549 2419 aa13.89□□□□□ -0.19
PDLIM5-202ENST00000318007 DNAJC13O75165 2243 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 A0A087WZY1 265 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 EIF1AYO14602 144 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 SERPINI2O75830 405 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 THRBP10828 461 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 POU3F2P20265 443 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 EIF1P41567 113 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 HTR3AP46098 478 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 HMGA2P52926 109 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 OR7A5Q15622 319 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 LINC00114Q6XXX2 140 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 TRILQ7L0X0 811 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 NR4A3Q92570 626 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 C9orf16Q9BUW7 83 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 SERINC1Q9NRX5 453 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 PCDHGB7Q9Y5F8 929 aa13.88□□□□□ -0.19
PDLIM5-202ENST00000318007 IGHV3-15A0A0B4J1V0 119 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 HPNP05981 417 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 KLK2P20151 261 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 POU1F1P28069 291 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 OMPP47874 163 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 AQP4P55087 323 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 MYBPHQ13203 477 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 C1orf140Q5VVS0 124 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF770Q6IQ21 691 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 SVOPLQ8N434 492 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 OR13C2Q8NGS9 318 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 PNPLA2Q96AD5 504 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 DDIT4LQ96D03 193 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 OR2B2Q9GZK3 357 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 ALKBH4Q9NXW9 302 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 PCDHGB6Q9Y5F9 930 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 IGSF10Q6WRI0 2623 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 TRGV5A0A0B4J1U4 118 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 A8MVM7 634 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 CDK2AP1O14519 115 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 IGFBP5P24593 272 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 POLR2IP36954 125 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 SUCLG1P53597 346 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms