RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TMED7Q9Y3B3 224 aa7.06□□□□□ -1.28
CDC42-201ENST00000315554 V9GYQ6 96 aa7.06□□□□□ -1.28
CDC42-201ENST00000315554 USP9XQ93008 2570 aaPredicted RBP7.06□□□□□ -1.28
CDC42-201ENST00000315554 RELNP78509 3460 aa7.06□□□□□ -1.28
CDC42-201ENST00000315554 IGHV3-15A0A0B4J1V0 119 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 A0A0G2JNJ9 132 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 A0A1B0GWA3 101 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ZC3H12DA2A288 527 aaKnown RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 CPSF4LA6NMK7 179 aaKnown RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 AHRRA9YTQ3 701 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ETV2O00321 342 aaPredicted RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 LGI1O95970 557 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SERPINA1P01009 418 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 GABRA1P14867 456 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 UQCRBP14927 111 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 GGT1P19440 569 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ENPP1P22413 925 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ELK4P28324 431 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SLC7A1P30825 629 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SLC1A3P43003 542 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 YAP1P46937 504 aaKnown RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 MNAT1P51948 309 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 POLR2HP52434 150 aaKnown RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 BPIFB3P59826 476 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 NCALDP61601 193 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SELENBP1Q13228 472 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 PON3Q15166 354 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 OR1Q1Q15612 314 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 BCL2A1Q16548 175 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 NRF1Q16656 503 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 NSUN5P2Q63ZY6 315 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 GLYATQ6IB77 296 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 WBP2NLQ6ICG8 309 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 C3orf33Q6P1S2 294 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 PLBD1Q6P4A8 553 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 DEF8Q6ZN54 512 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 P4HA3Q7Z4N8 544 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 VTCN1Q7Z7D3 282 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 MRGPRGQ86SM5 289 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 TSPYL5Q86VY4 417 aaPredicted RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 CARM1Q86X55 608 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 P3H2Q8IVL5 708 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 GCNT2Q8N0V5 402 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 OR52E4Q8NGH9 312 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 OR6T1Q8NGN1 323 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 FNDC9Q8TBE3 224 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ZPLD1Q8TCW7 415 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SSC4DQ8WTU2 575 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ITLN2Q8WWU7 325 aaPredicted RBP7.05□□□□□ -1.28
CDC42-201ENST00000315554 ROBO4Q8WZ75 1007 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 PROX1Q92786 737 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 OSTF1Q92882 214 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 C3orf49Q96BT1 292 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SDCCAG3Q96C92 435 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ITPKCQ96DU7 683 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ADGRG7Q96K78 797 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ARL5BQ96KC2 179 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 MCHR1Q99705 422 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 COQ10BQ9H8M1 238 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SERINC1Q9NRX5 453 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 TAS2R1Q9NYW7 299 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 Q9UFV3 132 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 CHRNA9Q9UGM1 479 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 CD300AQ9UGN4 299 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 CLEC4AQ9UMR7 237 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 RNF6Q9Y252 685 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 SH3GLB1Q9Y371 365 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 MYO7BQ6PIF6 2116 aa7.05□□□□□ -1.28
CDC42-201ENST00000315554 CLEC18AA5D8T8 446 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SLC22A20A6NK97 555 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 FAM90A27PA6NNH2 459 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 LINC01387J3KSC0 135 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SYT5O00445 386 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 FAAHO00519 579 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 AQP8O94778 261 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 HSD17B1P14061 328 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 RAC2P15153 192 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CXCR1P25024 350 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ADH6P28332 368 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 APOBEC1P41238 236 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 PER3P56645 1201 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CARD18P57730 90 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 RPS3AP61247 264 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 SIRPAP78324 504 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 FOXF2Q12947 444 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ZSWIM7Q19AV6 140 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SYT14P1Q58G82 188 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 SAMD4BQ5PRF9 694 aaKnown RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 PDSS1Q5T2R2 415 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 TMEM211Q6ICI0 200 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 MZT2AQ6P582 158 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CLEC18BQ6UXF7 455 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 ESPNLQ6ZVH7 1005 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 RANBP3LQ86VV4 465 aaPredicted RBP7.04□□□□□ -1.28
CDC42-201ENST00000315554 EID3Q8N140 333 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 FAM86B1Q8N7N1 296 aa7.04□□□□□ -1.28
CDC42-201ENST00000315554 CLEC18CQ8NCF0 446 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms