RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 BCL2L14Q9BZR8 327 aa12.62□□□□□ -0.39
DDX54-202ENST00000314045 GPN1Q9HCN4 374 aaPredicted RBP12.62□□□□□ -0.39
DDX54-202ENST00000314045 CHMP1AQ9HD42 196 aaPredicted RBP12.62□□□□□ -0.39
DDX54-202ENST00000314045 CTSFQ9UBX1 484 aa12.62□□□□□ -0.39
DDX54-202ENST00000314045 PSORS1C1Q9UIG5 152 aa12.62□□□□□ -0.39
DDX54-202ENST00000314045 WDR81Q562E7 1941 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 ANK1P16157 1881 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 TRAV36DV7A0A075B6V5 113 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 TMEM221A6NGB7 291 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 M0R296 226 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 PIP5K1CO60331 668 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 CD46P15529 392 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 ZNF45Q02386 682 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 GXYLT1Q4G148 440 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 TMEM41AQ96HV5 264 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 SLC22A4Q9H015 551 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 TTYH1Q9H313 450 aaPredicted RBP12.61□□□□□ -0.39
DDX54-202ENST00000314045 SATB2Q9UPW6 733 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 APOC1P02654 83 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 RAB25P57735 213 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 LSAMPQ13449 338 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 FAM189A2Q15884 450 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 ZNF322Q6U7Q0 402 aaPredicted RBP12.61□□□□□ -0.39
DDX54-202ENST00000314045 C5orf46Q6UWT4 87 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 OR5W2Q8NH69 310 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 TNFAIP8L1Q8WVP5 186 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 UCN3Q969E3 161 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 BCL7BQ9BQE9 202 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 SMURF1Q9HCE7 757 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 BABAM2Q9NXR7 383 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 SCN3AQ9NY46 2000 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 KDM4BO94953 1096 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 CD14P08571 375 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 PSMB10P40306 273 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 CSNK1A1P48729 337 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 ISL1P61371 349 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 FOXK2Q01167 660 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 TMEM179BQ7Z7N9 219 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 WACQ9BTA9 647 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 DUSP15Q9H1R2 295 aaPredicted RBP12.61□□□□□ -0.39
DDX54-202ENST00000314045 ENAMQ9NRM1 1142 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 ENPP5Q9UJA9 477 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 MCTS1Q9ULC4 181 aaKnown RBP12.61□□□□□ -0.39
DDX54-202ENST00000314045 ING4Q9UNL4 249 aa12.61□□□□□ -0.39
DDX54-202ENST00000314045 A8MVM7 634 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 ZNF432O94892 652 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 ATP1B1P05026 303 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 FCER2P06734 321 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 RRADP55042 308 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PCBP4P57723 403 aaKnown RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 SLC26A5P58743 744 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 GALNTL5Q7Z4T8 443 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 BCDIN3DQ7Z5W3 292 aaKnown RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 DTWD2Q8NBA8 298 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 OR5AK2Q8NH90 309 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PCDHGB6Q9Y5F9 930 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PCYT1BQ9Y5K3 369 aaPredicted RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 FUCA1P04066 466 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 UBE2IP63279 158 aaKnown RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 SIRT6Q8N6T7 355 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 ZNF775Q96BV0 537 aaPredicted RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 VWCEQ96DN2 955 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 NMNAT3Q96T66 252 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 ZNF160Q9HCG1 818 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 TDRD6O60522 2096 aaKnown RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 FAM25EA8MYX2 175 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 H7C1C5 153 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 S100GP29377 79 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 LCN6P62502 163 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PSPHP78330 225 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 GAB4Q2WGN9 574 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 TCEAL6Q6IPX3 200 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PFN4Q8NHR9 129 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 C4orf36Q96KX1 117 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 MED28Q9H204 178 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 TMEM165Q9HC07 324 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PCDHGA6Q9Y5G7 932 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 GPR179Q6PRD1 2367 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 SHISA7A6NL88 538 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 ZNF701M0R085 212 aaPredicted RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 RAB3BP20337 219 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 GRK5P34947 590 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 CYB561P49447 251 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 GRINAQ7Z429 371 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 ZNF582Q96NG8 517 aaPredicted RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 CCNL2Q96S94 520 aaPredicted RBP12.6□□□□□ -0.39
DDX54-202ENST00000314045 SP140LQ9H930 580 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
DDX54-202ENST00000314045 RAD1O60671 282 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 CSN2P05814 226 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 MSX1P28360 303 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 VASNQ6EMK4 673 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 SLC22A16Q86VW1 577 aa12.59□□□□□ -0.39
DDX54-202ENST00000314045 LRRC56Q8IYG6 542 aaPredicted RBP12.59□□□□□ -0.39
DDX54-202ENST00000314045 CPNE2Q96FN4 548 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms