RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 KLRF1Q9NZS2 232 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PRAMEF26H0Y7S4 382 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PRKCGP05129 697 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CPMP14384 443 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PXNP49023 591 aaPredicted RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CLDN20P56880 219 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PAGE3Q5JUK9 113 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 KIAA0895LQ68EN5 471 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SFXN4Q6P4A7 337 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 TCTN2Q96GX1 697 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PCED1AQ9H1Q7 454 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PATZ1Q9HBE1 687 aaKnown RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 HCCSP53701 268 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 FXNQ16595 210 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SSX8Q7RTT4 187 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 DTWD2Q8NBA8 298 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 DYNC2LI1Q8TCX1 351 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 HIPK2Q9H2X6 1198 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF354AO60765 605 aaPredicted RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SYNGR4O95473 234 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 IGHG1P01857 330 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ITGA3P26006 1051 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ISXQ2M1V0 245 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ACOT7LQ6ZUV0 252 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 DCBLD1Q8N8Z6 715 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 FRS2Q8WU20 508 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CLEC4EQ9ULY5 219 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ZBTB42B2RXF5 422 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 PTGESO14684 152 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 AMY2AP04746 511 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ELAVL4P26378 380 aaKnown RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 CAMLGP49069 296 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 DOC2BQ14184 412 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 OR4K1Q8NGD4 311 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 SLC41A2Q96JW4 573 aa8.24□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF443Q9Y2A4 671 aaPredicted RBP8.24□□□□□ -1.09
COL6A5-202ENST00000312481 BET1O15155 118 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 NID1P14543 1247 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 CNR1P21554 472 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 AHCYP23526 432 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SEC61A1P61619 476 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 GDF6Q6KF10 455 aaPredicted RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 B3GLCTQ6Y288 498 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 C19orf35Q6ZS72 473 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 CHIAQ9BZP6 476 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF195O14628 629 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 HLA-AP01891 365 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 PRR35P0CG20 571 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 PBX2P40425 430 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 POLR2HP52434 150 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 H3F3AP84243 136 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 TNFRSF17Q02223 184 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 VTCN1Q7Z7D3 282 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 OR6K2Q8NGY2 324 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 MSI2Q96DH6 328 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 BORCS8Q96FH0 119 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF582Q96NG8 517 aaPredicted RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 OR11A1Q9GZK7 315 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF385DQ9H6B1 395 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 PLEKHA2Q9HB19 425 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 MARCH4Q9P2E8 410 aaPredicted RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 MYOTQ9UBF9 498 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 PPIEQ9UNP9 301 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 RLFQ13129 1914 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 TRBV5-4A0A0C4DH59 114 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 C17orf112F2Z3M2 114 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 BEST1O76090 585 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 POU2F2P09086 479 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 CTSAP10619 480 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 BMP4P12644 408 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SUMO3P55854 103 aaPredicted RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 S100A10P60903 97 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 PLGLB1Q02325 96 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 EIF3IQ13347 325 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 DLEU7Q6UYE1 221 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 DGLUCYQ7Z3D6 616 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SLC6A20Q9NP91 592 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 GTF3C1Q12789 2109 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 C20orf202A1L168 122 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 GGHQ92820 318 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 KLHDC7BQ96G42 594 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 NOX3Q9HBY0 568 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 KIR2DS1A0A191URI9 304 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 E5RGE8 158 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SH3BGRLO75368 114 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 CD1AP06126 327 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 KIR2DS4P43632 304 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 DSC1Q08554 894 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 PLA2G7Q13093 441 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 KIR2DS1Q14954 304 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 COX19Q49B96 90 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SLC16A9Q7RTY1 509 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 ARFGAP1Q8N6T3 406 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 C10orf35Q96D05 121 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 EIF5A2Q9GZV4 153 aaKnown RBP8.23□□□□□ -1.09
COL6A5-202ENST00000312481 SAP130Q9H0E3 1048 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 A0A1B0GTQ1 180 aa8.23□□□□□ -1.09
COL6A5-202ENST00000312481 CD14P08571 375 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms