RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 EFNA1P20827 205 aaPredicted RBP5.56□□□□□ -1.52
SEC22A-201ENST00000309934 CDKN2CP42773 168 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 POU3F4P49335 361 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF81P51508 661 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 C19orf57Q0VDD7 668 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 CEBPEQ15744 281 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 PLK5Q496M5 336 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 TPRG1LQ5T0D9 272 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 IER5LQ5T953 404 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 TMEM17Q86X19 198 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 PLPP5Q8NEB5 264 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 PHOSPHO1Q8TCT1 267 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 MARC2Q969Z3 335 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 S100A13Q99584 98 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 DPCDQ9BVM2 203 aaPredicted RBP5.56□□□□□ -1.52
SEC22A-201ENST00000309934 GABARAPL3Q9BY60 117 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 MED28Q9H204 178 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 FN3KQ9H479 309 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 WDR54Q9H977 334 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 SLAMF7Q9NQ25 335 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 NTMQ9P121 344 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF639Q9UID6 485 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 PILRAQ9UKJ1 303 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 WASF3Q9UPY6 502 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 TRBV23-1A0A0A0MS06 115 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF860A6NHJ4 632 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 RGS13O14921 159 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 BET1O15155 118 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ALOX12BO75342 701 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 PRSS23O95084 383 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ETHE1O95571 254 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 MT-ATP6P00846 226 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 NID1P14543 1247 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 FPR3P25089 353 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 OPRL1P41146 370 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 SLC16A1P53985 500 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 PNLIPRP2P54317 469 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ACTA2P62736 377 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ACTG2P63267 376 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 DESI1Q6ICB0 168 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 LINC00299Q6ZSB3 139 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 MBOAT2Q6ZWT7 520 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 Q7L0L9 218 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 UBE2J2Q8N2K1 259 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 OR56B2PQ8NGI1 322 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 SLC2A12Q8TD20 617 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 RFT1Q96AA3 541 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 TXNDC15Q96J42 360 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 SLC41A2Q96JW4 573 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 ERMAPQ96PL5 475 aaPredicted RBP5.56□□□□□ -1.52
SEC22A-201ENST00000309934 TRAF4Q9BUZ4 470 aaPredicted RBP5.56□□□□□ -1.52
SEC22A-201ENST00000309934 TMED9Q9BVK6 235 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 BCL2L14Q9BZR8 327 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 EXOSC3Q9NQT5 275 aaKnown RBP5.56□□□□□ -1.52
SEC22A-201ENST00000309934 B3GNT2Q9NY97 397 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 SNX11Q9Y5W9 270 aa5.56□□□□□ -1.52
SEC22A-201ENST00000309934 DENND4CQ5VZ89 1909 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 COL4A2P08572 1712 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 OBSL1O75147 1896 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 A0A087WZY1 265 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 CCDC187A0A096LP49 1063 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 GXYLT2A0PJZ3 443 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 ASPDHA6ND91 283 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 SERINC4A6NH21 518 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 PRR19A6NJB7 356 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 LINC01387J3KSC0 135 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 HMGN4O00479 90 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 PDCD5O14737 125 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 KRT33AO76009 404 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 OPN1SWP03999 348 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 IFNA4P05014 189 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 PVRP15151 417 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 MYL9P24844 172 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 CA5AP35218 305 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 OR1D5P58170 312 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 SCN1BQ07699 218 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 NFATC3Q12968 1075 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 SELPLGQ14242 412 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 OXA1LQ15070 435 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.55□□□□□ -1.52
SEC22A-201ENST00000309934 NKAIN1Q4KMZ8 207 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF691Q5VV52 312 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 RHBDD2Q6NTF9 364 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 SLC23A3Q6PIS1 610 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 CXXC5Q7LFL8 322 aaKnown RBP5.55□□□□□ -1.52
SEC22A-201ENST00000309934 VN1R4Q7Z5H5 301 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 OR10H5Q8NGA6 315 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 OR4K5Q8NGD3 323 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 FAM216AQ8WUB2 273 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 SLC25A43Q8WUT9 341 aaPredicted RBP5.55□□□□□ -1.52
SEC22A-201ENST00000309934 UFD1Q92890 307 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 CDS1Q92903 461 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 GTPBP3Q969Y2 492 aaKnown RBP5.55□□□□□ -1.52
SEC22A-201ENST00000309934 FER1L6-AS2Q96M78 137 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 YIPF4Q9BSR8 244 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 MED18Q9BUE0 208 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 ITPAQ9BY32 194 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 SLC22A11Q9NSA0 550 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 KLRF1Q9NZS2 232 aa5.55□□□□□ -1.52
SEC22A-201ENST00000309934 MUTYHQ9UIF7 546 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms