RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 A0A0J9YW62 118 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 TMEM72A0PK05 275 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 MBD3L4A6NDZ8 208 aaPredicted RBP16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 MBD3L3A6NE82 208 aaPredicted RBP16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 MBD3L5A6NJ08 208 aaPredicted RBP16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SLC22A20A6NK97 555 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 CLCA1A8K7I4 914 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 TNFSF11O14788 317 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 AHSA1O95433 338 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 IGF2P01344 180 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 GPIP06744 558 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 IL11P20809 199 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 ATP6V1B2P21281 511 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 IDUAP35475 653 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SMSP52788 366 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SUCLG1P53597 346 aaKnown RBP16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 CDH12P55289 794 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SMIM11AP58511 58 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SLC35A1P78382 337 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 MS4A2Q01362 244 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 RIPPLY2Q5TAB7 128 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 C1QL3Q5VWW1 255 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 CYP2R1Q6VVX0 501 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 RBM45Q8IUH3 476 aaKnown RBP16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SLC43A2Q8N370 569 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 ATP6V1C2Q8NEY4 427 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 MBD3L2Q8NHZ7 208 aaPredicted RBP16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 OSTF1Q92882 214 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SLC41A3Q96GZ6 507 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 TRIB1Q96RU8 372 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 WFDC6Q9BQY6 131 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 FNDC11Q9BVV2 318 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 TAPBPLQ9BX59 468 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 AMBRA1Q9C0C7 1298 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 YY1AP1Q9H869 796 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 GP6Q9HCN6 339 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 GLRX2Q9NS18 164 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 CLCF1Q9UBD9 225 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 RIMS3Q9UJD0 308 aa16.08■□□□□ 0.16
SSSCA1-201ENST00000309328 SULT2B1O00204 365 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 LRRTM2O43300 516 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 NPIPB7O75200 414 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 IL2RAP01589 272 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 SEMG1P04279 462 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 FABP3P05413 133 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 CRHP06850 196 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 AGAP20933 346 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 DIO1P49895 249 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 CHRNB3Q05901 458 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 MYBPHQ13203 477 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 C1orf140Q5VVS0 124 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 TTC33Q6PID6 262 aaPredicted RBP16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 LINC00114Q6XXX2 140 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 PIWIL3Q7Z3Z3 882 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 P4HA3Q7Z4N8 544 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 OR10Q1Q8NGQ4 319 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 RNF217Q8TC41 542 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 RND1Q92730 232 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 RAB3IPQ96QF0 476 aaPredicted RBP16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNF300Q96RE9 604 aaPredicted RBP16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 DMRTA2Q96SC8 542 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 TTYH2Q9BSA4 534 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 TACO1Q9BSH4 297 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 PRRG4Q9BZD6 226 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 KLHL4Q9C0H6 718 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 COQ10BQ9H8M1 238 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 NDUFAF4Q9P032 175 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 SLC7A7Q9UM01 511 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 FAM215AQ9Y5M1 114 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 HEATR5AQ86XA9 2040 aa16.07■□□□□ 0.16
SSSCA1-201ENST00000309328 MYO18BQ8IUG5 2567 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 ESPL1Q14674 2120 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 NCKAP5O14513 1909 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 TRAV36DV7A0A075B6V5 113 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 TCRBV5S2A0A599 114 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 TNFRSF1BP20333 461 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 PIN1Q13526 163 aaPredicted RBP16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 GK3PQ14409 553 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 PON3Q15166 354 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 RNPS1Q15287 305 aaKnown RBP16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 HSPB2Q16082 182 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 FAM69AQ5T7M9 428 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 RTL6Q6ICC9 239 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 GDF7Q7Z4P5 450 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 FJX1Q86VR8 437 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 C10orf67Q8IYJ2 551 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 MFSD8Q8NHS3 518 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 C7orf34Q96L11 122 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 NAA11Q9BSU3 229 aaPredicted RBP16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 ZNF426Q9BUY5 554 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 COQ3Q9NZJ6 369 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 SH3BGRL2Q9UJC5 107 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 A4GNTQ9UNA3 340 aa16.06■□□□□ 0.16
SSSCA1-201ENST00000309328 A0A1W2PRQ8 180 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 DHRS12A0PJE2 317 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 CXCL13O43927 109 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 FZD7O75084 574 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 MT-ATP6P00846 226 aa16.05■□□□□ 0.16
SSSCA1-201ENST00000309328 GLI4P10075 376 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms