RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 ZNF350Q9GZX5 532 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 PNPLA3Q9NST1 481 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 STMN3Q9NZ72 180 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 PTGFRNQ9P2B2 879 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 MYOTQ9UBF9 498 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 ADAM21Q9UKJ8 722 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 IFT52Q9Y366 437 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 NOX1Q9Y5S8 564 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 SPTA1P02549 2419 aa7.54□□□□□ -1.2
CHD6-201ENST00000309279 FAM208BQ5VWN6 2430 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 A8MUI8 341 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 ZNF701M0R085 212 aaPredicted RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 SNX3O60493 162 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 PRAMEF2O60811 474 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 SHOX2O60902 331 aaPredicted RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 OR6B1O95007 311 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 RAB3DO95716 219 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 STAG3L2P0CL84 134 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 AREGP15514 252 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 S100A3P33764 101 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 MC3RP41968 323 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 POLR2JP52435 117 aaKnown RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 MLF1P58340 268 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 HBA1P69905 142 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 HSPB3Q12988 150 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 MFAP5Q13361 173 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 DGCR6Q14129 220 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 RCAN2Q14206 197 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 EXOSC7Q15024 291 aaKnown RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 EBPQ15125 230 aaKnown RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 MEP1AQ16819 746 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 BEX5Q5H9J7 111 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 MBNL2Q5VZF2 373 aaKnown RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 B3GNTL1Q67FW5 361 aaPredicted RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 TMEM107Q6UX40 140 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 SLC29A4Q7RTT9 530 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 PIGWQ7Z7B1 504 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 HPS6Q86YV9 775 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 FAM185AQ8N0U4 392 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 OR52R1Q8NGF1 315 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 OR9I1Q8NGQ6 314 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 HAS2Q92819 552 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 HOXB13Q92826 284 aaPredicted RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 ADIPOR1Q96A54 375 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 SLC25A36Q96CQ1 311 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 CCDC115Q96NT0 180 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 CHID1Q9BWS9 393 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 WWTR1Q9GZV5 400 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 FAM107BQ9H098 131 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.53□□□□□ -1.23e-6■■■■□ 20.8
CHD6-201ENST00000309279 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 ANKRA2Q9H9E1 313 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 ZBTB20Q9HC78 741 aaPredicted RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 SLC52A3Q9NQ40 469 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 ZFP57Q9NU63 452 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 TAS2R9Q9NYW1 312 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 PRODH2Q9UF12 536 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 CHRNA9Q9UGM1 479 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 CYB5R1Q9UHQ9 305 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 ENOPH1Q9UHY7 261 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 BTNL2Q9UIR0 455 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 LHX6Q9UPM6 363 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 MRPS7Q9Y2R9 242 aaKnown RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 FAM32AQ9Y421 112 aaKnown RBP7.53□□□□□ -1.2
CHD6-201ENST00000309279 ZNF451Q9Y4E5 1061 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 LIPGQ9Y5X9 500 aa7.53□□□□□ -1.2
CHD6-201ENST00000309279 CFAP73A6NFT4 308 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 C9JVG2 144 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 K7EM74 188 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 C6orf47O95873 294 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 NCF2P19878 526 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 EFNA1P20827 205 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 RYKP34925 604 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 GNG10P50151 68 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 CDK9P50750 372 aaKnown RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 DGKQP52824 942 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 UCP2P55851 309 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 PIGGQ5H8A4 983 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 CT83Q5H943 113 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 Q5PR19 223 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 ABHD17BQ5VST6 288 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 C1orf94Q6P1W5 598 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 TTC33Q6PID6 262 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 TMEM64Q6YI46 380 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 ZNF554Q86TJ5 538 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 SLC38A6Q8IZM9 456 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 RNASE8Q8TDE3 154 aaKnown RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 TMCO6Q96DC7 493 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 RMND5BQ96G75 393 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 VSTM2LQ96N03 204 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 OR52E6Q96RD3 313 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 UBL7Q96S82 380 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 TRIM15Q9C019 465 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 CDCP1Q9H5V8 836 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 CXorf36Q9H7Y0 433 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms