RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CDH10Q9Y6N8 788 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 FREM2Q5SZK8 3169 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TRAV27A0A087WT01 109 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 IGLV3-32A0A0A0MS00 114 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 EFCAB9A8MZ26 197 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TP53I11O14683 189 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 PTP4A3O75365 173 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 PNMTP11086 282 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 GIPRP48546 466 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 HLCSP50747 726 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 CDC42P60953 191 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 FOXC1Q12948 553 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 RTP5Q14D33 572 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 CLEC12AQ5QGZ9 265 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 DCAF10Q5QP82 559 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM81Q6P7N7 255 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 ARSKQ6UWY0 536 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 THSD4Q6ZMP0 1018 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 SATL1Q86VE3 508 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 CLDN22Q8N7P3 220 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 BPIFB6Q8NFQ5 453 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 OR4Q3Q8NH05 313 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TEX47Q8TBZ9 253 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 FANK1Q8TC84 345 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 PAQR8Q8TEZ7 354 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 FGF11Q92914 225 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TMIGD2Q96BF3 282 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 SAMD8Q96LT4 415 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 CCNL2Q96S94 520 aaPredicted RBP6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM43Q9BTV4 400 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 MRPS26Q9BYN8 205 aaKnown RBP6.32□□□□□ -1.4
PTCD2-201ENST00000308077 OR52D1Q9H346 318 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 C12orf10Q9HB07 376 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 HPF1Q9NWY4 346 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 ANKRD10Q9NXR5 420 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 PPP4R1LQ9P1A2 415 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 SIGLEC7Q9Y286 467 aa6.32□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM72A0PK05 275 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TRIM64CA6NLI5 447 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 PRKYO43930 277 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CH25HO95992 272 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 HTR1AP08908 422 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CCDC159P0C7I6 412 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SAGP10523 405 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 PRKCAP17252 672 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 WT1P19544 449 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CCNA2P20248 432 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SUMO3P55854 103 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 EFNB1P98172 346 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 LTBQ06643 244 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 PIGFQ07326 219 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 ACER2Q5QJU3 275 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SLC30A6Q6NXT4 461 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 POMZP3Q6PJE2 187 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 MDGA2Q7Z553 956 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 BCDIN3DQ7Z5W3 292 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF227Q86WZ6 799 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 ADGRG3Q86Y34 549 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CDK20Q8IZL9 346 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 BEST3Q8N1M1 668 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 DEPDC4Q8N2C3 294 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM156Q8N614 296 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 LRRC17Q8N6Y2 441 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 FADS6Q8N9I5 356 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 WDSUB1Q8N9V3 476 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 OR2M3Q8NG83 312 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 KIAA1143Q96AT1 154 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 KTI12Q96EK9 354 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SGTBQ96EQ0 304 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 IL4I1Q96RQ9 567 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SECISBP2Q96T21 854 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TSSK6Q9BXA6 273 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 ANGPTL4Q9BY76 406 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SLC19A3Q9BZV2 496 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 MCCC2Q9HCC0 563 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CPNE5Q9HCH3 593 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TBC1D23Q9NUY8 699 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 IMPAD1Q9NX62 359 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TVP23BQ9NYZ1 205 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 FBXL2Q9UKC9 423 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 MED13Q9UHV7 2174 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TMED7-TICAM2A0A0A6YYA0 188 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 ZC3H12DA2A288 527 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SHISA8B8ZZ34 492 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 G3V3Y1 287 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 ETV2O00321 342 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 BHLHE40O14503 412 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 OR7A10O76100 309 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 POLR2HP52434 150 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SMSP52788 366 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 NUDT6P53370 316 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 MLLT10P55197 1068 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 DLX5P56178 289 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 GABARAPL2P60520 117 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CXCR4P61073 352 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 FOXF1Q12946 379 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SNTA1Q13424 505 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 515.4 ms