RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PCOLCEQ15113 449 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 KLHL22Q53GT1 634 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 FAM199XQ6PEV8 388 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 C16orf47Q6ZP98 133 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RTL4Q6ZR62 310 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 SLC46A3Q7Z3Q1 461 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 OR5L2Q8NGL0 311 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 OR51A7Q8NH64 312 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 OR5W2Q8NH69 310 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 LIPHQ8WWY8 451 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 HGDQ93099 445 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 C8orf44Q96CB5 159 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 LGALS12Q96DT0 336 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 DCUN1D5Q9BTE7 237 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ADAM19Q9H013 955 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RACGAP1Q9H0H5 632 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 CMC2Q9NRP2 79 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ITPR1Q14643 2758 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 PCNX2A6NKB5 2137 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 GNB5O14775 395 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 SLC22A1O15245 554 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 KLF7O75840 302 aaPredicted RBP10.83□□□□□ -0.68
TRIM40-205ENST00000307859 ZFAND5O76080 213 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 OR7A10O76100 309 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 PLA2G2AP14555 144 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 HTR1FP30939 366 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 ETV5P41161 510 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 P2RX1P51575 399 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 RPS4XP62701 263 aaKnown RBP10.83□□□□□ -0.68
TRIM40-205ENST00000307859 E2F1Q01094 437 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 ROR2Q01974 943 aaKnown RBP10.83□□□□□ -0.68
TRIM40-205ENST00000307859 C3orf38Q5JPI3 329 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 CDCP2Q5VXM1 449 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
TRIM40-205ENST00000307859 NUP54Q7Z3B4 507 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 MISPQ8IVT2 679 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 GID4Q8IVV7 300 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 NANOGP1Q8N7R0 232 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 GALNT6Q8NCL4 622 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 PROKR2Q8NFJ6 384 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 SH3YL1Q96HL8 342 aaPredicted RBP10.83□□□□□ -0.68
TRIM40-205ENST00000307859 OR5M11Q96RB7 305 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 TNFRSF13CQ96RJ3 184 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 IFT27Q9BW83 186 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 MND1Q9BWT6 205 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 TAPBPLQ9BX59 468 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 STRADBQ9C0K7 418 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 ZBTB20Q9HC78 741 aaPredicted RBP10.83□□□□□ -0.68
TRIM40-205ENST00000307859 ERGIC3Q9Y282 383 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 LOXL2Q9Y4K0 774 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 B3GALT1Q9Y5Z6 326 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 AKAP13Q12802 2813 aa10.83□□□□□ -0.68
TRIM40-205ENST00000307859 DMXL2Q8TDJ6 3036 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 IGHV1-45A0A0A0MS14 117 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 SCO2O43819 266 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 CDC40O60508 579 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 CSO75390 466 aaKnown RBP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 NDUFB2O95178 105 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 PPP1R3DO95685 299 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 PGCP20142 388 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 NR4A1P22736 598 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 FBXW4P57775 412 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 INSM1Q01101 510 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 EGR4Q05215 589 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 CBFBQ13951 182 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 DOC2BQ14184 412 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 SPCS2Q15005 226 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF74Q16587 644 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ARMCX4Q5H9R4 360 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 DCAF12Q5T6F0 453 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 NIPAL3Q6P499 406 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ARHGAP11AQ6P4F7 1023 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 CPOQ8IVL8 374 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 LSM14AQ8ND56 463 aaKnown RBP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 OR2Y1Q8NGV0 311 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF563Q8TA94 476 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ELP5Q8TE02 316 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 TTC9Q92623 222 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 MGLLQ99685 303 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ZPBPQ9BS86 351 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF700Q9H0M5 742 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 MYOTQ9UBF9 498 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 CHRNA9Q9UGM1 479 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 EXOGQ9Y2C4 368 aaKnown RBP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF337Q9Y3M9 751 aa10.82□□□□□ -0.68
TRIM40-205ENST00000307859 TEX51A0A1B0GUA7 166 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 SPAARA0A1B0GVQ0 90 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 A0A1W2PQ72 361 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 C17orf51A8MQB3 221 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 WWP2O00308 870 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 BCL10O95999 233 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 COX6A1P12074 109 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 PEPDP12955 493 aa10.81□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF182P17025 639 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms