RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PSMB1P20618 241 aaKnown RBP10.11□□□□□ -0.79
LSM3-201ENST00000306024 HTR2AP28223 471 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 GIPRP48546 466 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 RPS26P62854 115 aaKnown RBP10.11□□□□□ -0.79
LSM3-201ENST00000306024 DEFA6Q01524 100 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 TPBGQ13641 420 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 ARHGAP19Q14CB8 494 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 AGERQ15109 404 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 SYT14P1Q58G82 188 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 FAM74A1Q5RGS3 127 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 HBMQ6B0K9 141 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 ZNF425Q6IV72 752 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 REEP3Q6NUK4 255 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 C19orf48Q6RUI8 117 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 FBXO15Q8NCQ5 510 aaPredicted RBP10.11□□□□□ -0.79
LSM3-201ENST00000306024 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 SFT2D1Q8WV19 159 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 HGDQ93099 445 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 NDOR1Q9UHB4 597 aa10.11□□□□□ -0.79
LSM3-201ENST00000306024 KIR2DS5A0A0G2JLQ3 304 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 A0A0G2JNG1 304 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 A0A1W2PRB8 838 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 FEZF1A0PJY2 475 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 KIR2DS3K7RE56 304 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SCAMP2O15127 329 aaKnown RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 FARS2O95363 451 aaKnown RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 KCNJ3P48549 501 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 PRKAG1P54619 331 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 TAS2R41P59536 307 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 PIN1Q13526 163 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 KIR2DS5Q14953 304 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 GSG1Q2KHT4 349 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 RPS26P11Q5JNZ5 115 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 PRSS45Q7RTY3 260 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 HSD17B13Q7Z5P4 300 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 C1orf210Q8IVY1 113 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 OR4K5Q8NGD3 323 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ZCCHC10Q8TBK6 192 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 CPNE2Q96FN4 548 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 YIPF4Q9BSR8 244 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SPATA5L1Q9BVQ7 753 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 FN3KQ9H479 309 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 IL21RQ9HBE5 538 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ASIC5Q9NY37 505 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 PURGQ9UJV8 347 aaKnown RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 UNC13CQ8NB66 2214 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ADAM11O75078 769 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 HPXP02790 462 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 IFNA4P05014 189 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SULT1A3P0DMM9 295 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SULT1A4P0DMN0 295 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ACP2P11117 423 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 GDNFP39905 211 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 GAB1Q13480 694 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 HLXQ14774 488 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 RGS7BPQ6MZT1 257 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 HMGN2P46Q86SG4 172 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 WDSUB1Q8N9V3 476 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 HUS1BQ8NHY5 278 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 NR4A3Q92570 626 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ELP4Q96EB1 424 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 OR51I1Q9H343 314 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 NOX3Q9HBY0 568 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 TRIM36Q9NQ86 728 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 MYEF2Q9P2K5 600 aaKnown RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 CTSFQ9UBX1 484 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 PCYT1BQ9Y5K3 369 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 SLC9B1P1A6NJY1 282 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 CPSF4LA6NMK7 179 aaKnown RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 E9PI62 339 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ADRA2AP08913 450 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 S100PP25815 95 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 FAUP35544 74 aaKnown RBP10.1□□□□□ -0.79
LSM3-201ENST00000306024 ACVR1BP36896 505 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SLC1A3P43003 542 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 DLX5P56178 289 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 HACD4Q5VWC8 232 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SMARCD3Q6STE5 483 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 OR52N2Q8NGI0 321 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 OR6S1Q8NH40 331 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SLC37A2Q8TED4 501 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 UBTD2Q8WUN7 234 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 VOPP1Q96AW1 172 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 S100PBPQ96BU1 408 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 ABCG4Q9H172 646 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 AUP1Q9Y679 476 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 SPACA6W5XKT8 324 aa10.1□□□□□ -0.79
LSM3-201ENST00000306024 C2orf74A8MZ97 194 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 SULT1C2O00338 296 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 GOSR2O14653 212 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 HLA-DQB1P01920 261 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 SLC35G6P0C7Q6 338 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 XCR1P46094 333 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 PSMD4P55036 377 aaKnown RBP10.09□□□□□ -0.79
LSM3-201ENST00000306024 MANFP55145 182 aaKnown RBP10.09□□□□□ -0.79
LSM3-201ENST00000306024 USP53Q70EK8 1073 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
LSM3-201ENST00000306024 PCED1AQ9H1Q7 454 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms