RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NR1H2P55055 460 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 OR2B6P58173 313 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 GCNT6Q5T4J0 391 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 WBP2NLQ6ICG8 309 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 Q6ZT83 130 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 KISS1RQ969F8 398 aaPredicted RBP23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 S100PBPQ96BU1 408 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 VAPAQ9P0L0 249 aa23.46■■□□□ 1.35
CDKN2A-201ENST00000304494 EVPLLA8MZ36 301 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 ZNF814B7Z6K7 855 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 GPR171O14626 319 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 PGM3O95394 542 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 CNOT4O95628 575 aaKnown RBP23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 ADAP00813 363 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 ETS2P15036 469 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 CXCR1P25024 350 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 SLC35A1P78382 337 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 ITGADQ13349 1161 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 ZNF100Q8IYN0 542 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 CLIP4Q8N3C7 705 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 CADM2Q8N3J6 435 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 SLC35B4Q969S0 331 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 ZNF775Q96BV0 537 aaPredicted RBP23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 DNAJA3Q96EY1 480 aa23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 NAA11Q9BSU3 229 aaPredicted RBP23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 LEF1Q9UJU2 399 aaPredicted RBP23.45■■□□□ 1.34
CDKN2A-201ENST00000304494 TRBV5-3A0A0A0MS03 114 aa23.44■■□□□ 1.34
CDKN2A-201ENST00000304494 CD53P19397 219 aa23.44■■□□□ 1.34
CDKN2A-201ENST00000304494 WFDC8Q8IUA0 241 aa23.44■■□□□ 1.34
CDKN2A-201ENST00000304494 HS3ST6Q96QI5 342 aa23.44■■□□□ 1.34
CDKN2A-201ENST00000304494 POTEKPQ9BYX7 375 aa23.44■■□□□ 1.34
CDKN2A-201ENST00000304494 NOSIPQ9Y314 301 aaKnown RBP23.44■■□□□ 1.34
CDKN2A-201ENST00000304494 A0A0G2JND7 137 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 ZNF716A6NP11 495 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 KLF4O43474 513 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 ARAFP10398 606 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 FPR1P21462 350 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 SLC16A1P53985 500 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 H3F3AP84243 136 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 CDK6Q00534 326 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 METTL21CQ5VZV1 264 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 REEP3Q6NUK4 255 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 KRT73Q86Y46 540 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 NFKBIDQ8NI38 313 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 HSD17B8Q92506 261 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 SPATA5L1Q9BVQ7 753 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 ZNF385DQ9H6B1 395 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 BEX4Q9NWD9 120 aaPredicted RBP23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 PRSS50Q9UI38 385 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 CHST2Q9Y4C5 530 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 ABCA4P78363 2273 aa23.43■■□□□ 1.34
CDKN2A-201ENST00000304494 HIVEP1P15822 2718 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 IMPDH2P12268 514 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 GPX2P18283 190 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 LOXP28300 417 aaPredicted RBP23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 PRKAR1BP31321 381 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 IDUAP35475 653 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 SERPINA11Q86U17 422 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 TSPEARQ8WU66 669 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 TMEM38AQ9H6F2 299 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 UBTD1Q9HAC8 227 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 NGBQ9NPG2 151 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 NDUFAF1Q9Y375 327 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 AKAP6Q13023 2319 aa23.42■■□□□ 1.34
CDKN2A-201ENST00000304494 ZC3H12DA2A288 527 aaKnown RBP23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 ANGPT2O15123 496 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 GPIP06744 558 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 PRG2P13727 222 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 TSC22D1Q15714 1073 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 ACKR1Q16570 336 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 PAQR6Q6TCH4 344 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 C20orf204Q6ZNR8 217 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 BHLHA15Q7RTS1 189 aaPredicted RBP23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 CCDC103Q8IW40 242 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 APH1AQ96BI3 265 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 PLPPR2Q96GM1 343 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 F8P00451 2351 aa23.41■■□□□ 1.34
CDKN2A-201ENST00000304494 A8MVM7 634 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 SLC6A2P23975 617 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 DLEU7Q6UYE1 221 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 DHDDSQ86SQ9 333 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 TGIF2LYQ8IUE0 185 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 C10orf111Q8N326 155 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 PIGTQ969N2 578 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 CPPED1Q9BRF8 314 aaPredicted RBP23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 IKZF5Q9H5V7 419 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 MRGBPQ9NV56 204 aa23.4■■□□□ 1.34
CDKN2A-201ENST00000304494 MRPL33O75394 65 aaKnown RBP23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 TROVE2P10155 538 aaKnown RBP eCLIP23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 COX5AP20674 150 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 CEACAM7Q14002 265 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 SCARB2Q14108 478 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 RUNDC3AQ59EK9 446 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 FBXW9Q5XUX1 488 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 ALKBH2Q6NS38 261 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 SSX8Q7RTT4 187 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 UBE2J2Q8N2K1 259 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms