RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ZNF74Q16587 644 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 LCN1P1Q5VSP4 162 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 DCDC5Q6ZRR9 648 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 LANCL3Q6ZV70 420 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 MISPQ8IVT2 679 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 PRSS58Q8IYP2 241 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 NFAM1Q8NET5 270 aaPredicted RBP17.74■□□□□ 0.43
HOXC4-201ENST00000303406 NUBPLQ8TB37 319 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 IFI44Q8TCB0 444 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 NACC2Q96BF6 587 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 COX4I2Q96KJ9 171 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 KCTD7Q96MP8 289 aa17.74■□□□□ 0.43
HOXC4-201ENST00000303406 IQCMA0A1B0GVH7 501 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 PRKNO60260 465 aaPredicted RBP17.73■□□□□ 0.43
HOXC4-201ENST00000303406 FGF5P12034 268 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 RPS19P39019 145 aaKnown RBP17.73■□□□□ 0.43
HOXC4-201ENST00000303406 CD79BP40259 229 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 RPS25P62851 125 aaKnown RBP17.73■□□□□ 0.43
HOXC4-201ENST00000303406 RNF4P78317 190 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 LGALS3BPQ08380 585 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 IL10RAQ13651 578 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 KLHL12Q53G59 568 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 SLC35D3Q5M8T2 416 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 PWWP2BQ6NUJ5 590 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 SLC23A3Q6PIS1 610 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 BTLAQ7Z6A9 289 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 PPP1R3BQ86XI6 285 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 GPALPP1Q8IXQ4 340 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 PRR22Q8IZ63 422 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 OR8K3Q8NH51 312 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 ALG8Q9BVK2 526 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 MROQ9BYG7 248 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 ADGRL4Q9HBW9 690 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 FSCN3Q9NQT6 498 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 BABAM2Q9NXR7 383 aa17.73■□□□□ 0.43
HOXC4-201ENST00000303406 ISPDA4D126 451 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 IDSB3KWA1 339 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 MCIDASD6RGH6 385 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 GNB5O14775 395 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 NDUFB5O43674 189 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 FADS1O60427 444 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 CBFA2T3O75081 653 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 LALBAP00709 142 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 PGCP20142 388 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 MST1P26927 711 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 CCR4P51679 360 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 NRG3P56975 720 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 RPS7P62081 194 aaKnown RBP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ZNF791Q3KP31 576 aaPredicted RBP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 CCDC190Q86UF4 302 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 CENPSQ8N2Z9 138 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 POMGNT2Q8NAT1 580 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 SLC38A9Q8NBW4 561 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 OR5W2Q8NH69 310 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ZNF563Q8TA94 476 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 METTL21AQ8WXB1 218 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 SLC25A46Q96AG3 418 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 PPP1R14BQ96C90 147 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 DDOQ99489 341 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 TBL1XR1Q9BZK7 514 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 NRSN2Q9GZP1 204 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 OR51V1Q9H2C8 321 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 MMP25Q9NPA2 562 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 POLHQ9Y253 713 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 UGT2A1Q9Y4X1 527 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 NOX1Q9Y5S8 564 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 IER3IP1Q9Y5U9 82 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 DAPL1A0PJW8 107 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 NTN3O00634 580 aaPredicted RBP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 TIAF1O95411 115 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 TXNDC12O95881 172 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 SYPP08247 313 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ASAH2BP0C7U1 165 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 NAGAP17050 411 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 TAS2R43P59537 309 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 DAB2P98082 770 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 RUNX1T1Q06455 604 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 CBFBQ13951 182 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 IL11RAQ14626 422 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ZNF181Q2M3W8 571 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 CRTC2Q53ET0 693 aaPredicted RBP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 LRRC17Q8N6Y2 441 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ARIH2OSQ8N7S6 290 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 TMEM99Q8N816 258 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 LRRC75AQ8NAA5 344 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 FAM98AQ8NCA5 519 aaKnown RBP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ATP6V1C2Q8NEY4 427 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 OR52E2Q8NGJ4 325 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 C1GALT1C1Q96EU7 318 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 WDFY2Q96P53 400 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 GFM1Q96RP9 751 aaKnown RBP17.72■□□□□ 0.43
HOXC4-201ENST00000303406 PHOX2BQ99453 314 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 SMURF1Q9HCE7 757 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 WDR70Q9NW82 654 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 ZNF229Q9UJW7 825 aa17.72■□□□□ 0.43
HOXC4-201ENST00000303406 HEATR5AQ86XA9 2040 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 PI4KAP42356 2102 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 CABIN1Q9Y6J0 2220 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms